Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATAD5 | ATM | ENSCHIP00000016824 | ENSCHIP00000016363 | ATPase family AAA domain containing 5. | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | 0.656 |
| ATAD5 | BRCA1 | ENSCHIP00000016824 | ENSCHIP00000033014 | ATPase family AAA domain containing 5. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.655 |
| ATAD5 | BRD2 | ENSCHIP00000016824 | ENSCHIP00000012020 | ATPase family AAA domain containing 5. | Bromodomain containing 2. | 0.468 |
| ATAD5 | BRD3 | ENSCHIP00000016824 | ENSCHIP00000003456 | ATPase family AAA domain containing 5. | Bromodomain containing 3. | 0.494 |
| ATAD5 | BRD4 | ENSCHIP00000016824 | ENSCHIP00000020041 | ATPase family AAA domain containing 5. | Uncharacterized protein. | 0.719 |
| ATAD5 | CDC6 | ENSCHIP00000016824 | ENSCHIP00000005199 | ATPase family AAA domain containing 5. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.714 |
| ATAD5 | CUL4A | ENSCHIP00000016824 | ENSCHIP00000000333 | ATPase family AAA domain containing 5. | Cullin 4A; Belongs to the cullin family. | 0.456 |
| ATAD5 | DNA2 | ENSCHIP00000016824 | ENSCHIP00000020258 | ATPase family AAA domain containing 5. | DNA replication helicase/nuclease 2. | 0.829 |
| ATAD5 | DONSON | ENSCHIP00000016824 | ENSCHIP00000022716 | ATPase family AAA domain containing 5. | Downstream neighbor of SON. | 0.469 |
| ATAD5 | ETAA1 | ENSCHIP00000016824 | ENSCHIP00000033434 | ATPase family AAA domain containing 5. | ETAA1 activator of ATR kinase. | 0.413 |
| ATAD5 | FAAP100 | ENSCHIP00000016824 | ENSCHIP00000020356 | ATPase family AAA domain containing 5. | FA core complex associated protein 100. | 0.513 |
| ATAD5 | FANCM | ENSCHIP00000016824 | ENSCHIP00000013958 | ATPase family AAA domain containing 5. | FA complementation group M. | 0.818 |
| ATAD5 | HUS1 | ENSCHIP00000016824 | ENSCHIP00000028772 | ATPase family AAA domain containing 5. | Checkpoint protein; Belongs to the HUS1 family. | 0.521 |
| ATAD5 | LIG4 | ENSCHIP00000016824 | ENSCHIP00000000867 | ATPase family AAA domain containing 5. | DNA ligase. | 0.653 |
| ATAD5 | PCNA | ENSCHIP00000016824 | ENSCHIP00000015091 | ATPase family AAA domain containing 5. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.953 |
| ATAD5 | POLA2 | ENSCHIP00000016824 | ENSCHIP00000024367 | ATPase family AAA domain containing 5. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.830 |
| ATAD5 | POLD1 | ENSCHIP00000016824 | ENSCHIP00000019836 | ATPase family AAA domain containing 5. | DNA polymerase. | 0.748 |
| ATAD5 | POLE2 | ENSCHIP00000016824 | ENSCHIP00000028310 | ATPase family AAA domain containing 5. | DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. | 0.779 |
| ATAD5 | POLE3 | ENSCHIP00000016824 | ENSCHIP00000022059 | ATPase family AAA domain containing 5. | CBFD_NFYB_HMF domain-containing protein. | 0.637 |
| ATAD5 | POLE4 | ENSCHIP00000016824 | ENSCHIP00000028280 | ATPase family AAA domain containing 5. | DNA polymerase epsilon 4, accessory subunit. | 0.677 |
page 1 of 88