23 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CYTL1	Cytokine like 1. (136 aa)
	HEY2	Hes related family bHLH transcription factor with YRPW motif 2. (337 aa)
	COL4A2	Collagen type IV alpha 2 chain. (1607 aa)
	COL1A2	Collagen type I alpha 2 chain. (1128 aa)
	LYVE1	Lymphatic vessel endothelial hyaluronan receptor 1. (322 aa)
	NR2F2	Nuclear receptor subfamily 2 group F member 2. (419 aa)
	COL4A1	Collagen type IV alpha 1 chain. (1608 aa)
	CD44	CD44 molecule (Indian blood group). (715 aa)
	COL1A1	Collagen type I alpha 1 chain. (1463 aa)
	NOTCH1	Notch receptor 1. (2508 aa)
	NOTCH4	Notch receptor 4. (1966 aa)
	MYO5C	Myosin VC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1686 aa)
	FLT1	Fms related tyrosine kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1337 aa)
	ANGPT2	Angiopoietin 2. (498 aa)
	KLF4	Kruppel like factor 4. (510 aa)
	PXDN	Peroxidasin. (1525 aa)
	CXCR4	C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family. (353 aa)
	TIE1	Tyrosine kinase with immunoglobulin like and EGF like domains 1. (1139 aa)
	VWF	Von Willebrand factor. (2819 aa)
	EDN1	Endothelin 1. (202 aa)
	NRP1	Neuropilin; Belongs to the neuropilin family. (923 aa)
	KDR	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1390 aa)
	CD34	Uncharacterized protein. (384 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANGPT2	CD34	ENSCHIP00000020580	ENSCHIP00000002645	Angiopoietin 2.	Uncharacterized protein.	0.569
ANGPT2	CXCR4	ENSCHIP00000020580	ENSCHIP00000011766	Angiopoietin 2.	C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.	0.424
ANGPT2	EDN1	ENSCHIP00000020580	ENSCHIP00000008821	Angiopoietin 2.	Endothelin 1.	0.718
ANGPT2	FLT1	ENSCHIP00000020580	ENSCHIP00000021173	Angiopoietin 2.	Fms related tyrosine kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.933
ANGPT2	KDR	ENSCHIP00000020580	ENSCHIP00000003056	Angiopoietin 2.	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.909
ANGPT2	LYVE1	ENSCHIP00000020580	ENSCHIP00000030521	Angiopoietin 2.	Lymphatic vessel endothelial hyaluronan receptor 1.	0.757
ANGPT2	NRP1	ENSCHIP00000020580	ENSCHIP00000003879	Angiopoietin 2.	Neuropilin; Belongs to the neuropilin family.	0.465
ANGPT2	TIE1	ENSCHIP00000020580	ENSCHIP00000011372	Angiopoietin 2.	Tyrosine kinase with immunoglobulin like and EGF like domains 1.	0.969
ANGPT2	VWF	ENSCHIP00000020580	ENSCHIP00000010569	Angiopoietin 2.	Von Willebrand factor.	0.789
CD34	ANGPT2	ENSCHIP00000002645	ENSCHIP00000020580	Uncharacterized protein.	Angiopoietin 2.	0.569
CD34	CD44	ENSCHIP00000002645	ENSCHIP00000024231	Uncharacterized protein.	CD44 molecule (Indian blood group).	0.949
CD34	COL1A1	ENSCHIP00000002645	ENSCHIP00000023918	Uncharacterized protein.	Collagen type I alpha 1 chain.	0.659
CD34	CXCR4	ENSCHIP00000002645	ENSCHIP00000011766	Uncharacterized protein.	C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.	0.845
CD34	FLT1	ENSCHIP00000002645	ENSCHIP00000021173	Uncharacterized protein.	Fms related tyrosine kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.669
CD34	KDR	ENSCHIP00000002645	ENSCHIP00000003056	Uncharacterized protein.	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.883
CD34	KLF4	ENSCHIP00000002645	ENSCHIP00000017278	Uncharacterized protein.	Kruppel like factor 4.	0.694
CD34	LYVE1	ENSCHIP00000002645	ENSCHIP00000030521	Uncharacterized protein.	Lymphatic vessel endothelial hyaluronan receptor 1.	0.848
CD34	NOTCH1	ENSCHIP00000002645	ENSCHIP00000023681	Uncharacterized protein.	Notch receptor 1.	0.588
CD34	NOTCH4	ENSCHIP00000002645	ENSCHIP00000022833	Uncharacterized protein.	Notch receptor 4.	0.473
CD34	PXDN	ENSCHIP00000002645	ENSCHIP00000015493	Uncharacterized protein.	Peroxidasin.	0.794