STRINGSTRING
PCNA PCNA ATM ATM ESCO1 ESCO1 DNA2 DNA2 CHD4 CHD4 BRCA2 BRCA2 LOC102189503 LOC102189503 ATAD2 ATAD2 MUS81 MUS81 HLTF HLTF SMARCAL1 SMARCAL1 ZRANB3 ZRANB3 FANCD2 FANCD2 BRCA1 BRCA1 H2BC12 H2BC12 LOC102185882 LOC102185882 LOC102180307 LOC102180307 LOC102191748 LOC102191748 LOC108633554 LOC108633554 LOC102181912 LOC102181912 LOC102182848 LOC102182848 LOC102175243 LOC102175243 RAD50 RAD50 EZH2 EZH2 LOC108636012 LOC108636012 H2BC18 H2BC18 LOC102172226 LOC102172226 H3-4 H3-4 LOC108634231 LOC108634231 LOC102179187 LOC102179187 H2BC1 H2BC1 H2BC15 H2BC15 H2BU1 H2BU1 H2BC5 H2BC5 LOC102172954 LOC102172954 LOC102180554 LOC102180554 LOC106503499 LOC106503499 LOC106503502 LOC106503502 LOC108633916 LOC108633916 LOC108636047 LOC108636047 LOC106503503 LOC106503503 H2BC3 H2BC3 H2BC11 H2BC11 LOC102171353 LOC102171353 LOC102169981 LOC102169981 ENSCHIP00000009386 ENSCHIP00000009386 H2BE1 H2BE1 ESCO2 ESCO2 H2BC21 H2BC21 EXO1 EXO1 WRN WRN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3058 aa)
ESCO1Establishment of sister chromatid cohesion N-acetyltransferase 1. (841 aa)
DNA2DNA replication helicase/nuclease 2. (1062 aa)
CHD4Uncharacterized protein. (1905 aa)
BRCA2BRCA2 DNA repair associated. (3405 aa)
LOC102189503Histone H3; Belongs to the histone H3 family. (136 aa)
ATAD2ATPase family AAA domain containing 2. (1385 aa)
MUS81MUS81 structure-specific endonuclease subunit. (552 aa)
HLTFHelicase like transcription factor. (1011 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (930 aa)
ZRANB3Zinc finger RANBP2-type containing 3. (1070 aa)
FANCD2FA complementation group D2. (1423 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1843 aa)
H2BC12Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102185882Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102180307Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC102191748Histone domain-containing protein. (136 aa)
LOC108633554Histone domain-containing protein. (136 aa)
LOC102181912Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102182848Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102175243Histone domain-containing protein; Belongs to the histone H2B family. (122 aa)
RAD50Zinc-hook domain-containing protein. (1332 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (746 aa)
LOC108636012Histone H3; Belongs to the histone H3 family. (136 aa)
H2BC18Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102172226Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
H3-4Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108634231Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102179187Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
H2BC15Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC5Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102172954Histone H4. (103 aa)
LOC102180554Histone H3; Belongs to the histone H3 family. (136 aa)
LOC106503499Histone H3; Belongs to the histone H3 family. (136 aa)
LOC106503502Histone H4. (103 aa)
LOC108633916Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108636047Histone H4. (103 aa)
LOC106503503Histone H4. (103 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC11Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102171353Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102169981Histone domain-containing protein. (136 aa)
ENSCHIP00000009386Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
H2BE1Histone H2B; Belongs to the histone H2B family. (122 aa)
ESCO2Establishment of sister chromatid cohesion N-acetyltransferase 2. (610 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
EXO1Exonuclease 1. (835 aa)
WRNWRN RecQ like helicase. (1405 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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