10 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHGDH	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (533 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	GLDC	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1020 aa)
	GCSH	Glycine cleavage system protein H. (173 aa)
	SHMT2	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (502 aa)
	LOC108634030	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (173 aa)
	TGFB1	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	ACTB	Uncharacterized protein. (375 aa)
	SHMT1	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (484 aa)
	PXDN	Peroxidasin. (1525 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	GAPDH	ENSCHIP00000011080	ENSCHIP00000025974	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.979
ACTB	PXDN	ENSCHIP00000011080	ENSCHIP00000015493	Uncharacterized protein.	Peroxidasin.	0.962
ACTB	TGFB1	ENSCHIP00000011080	ENSCHIP00000008885	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.831
GAPDH	ACTB	ENSCHIP00000025974	ENSCHIP00000011080	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.979
GAPDH	PHGDH	ENSCHIP00000025974	ENSCHIP00000019405	Glyceraldehyde-3-phosphate dehydrogenase.	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.555
GAPDH	PXDN	ENSCHIP00000025974	ENSCHIP00000015493	Glyceraldehyde-3-phosphate dehydrogenase.	Peroxidasin.	0.974
GAPDH	SHMT1	ENSCHIP00000025974	ENSCHIP00000011211	Glyceraldehyde-3-phosphate dehydrogenase.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.436
GAPDH	SHMT2	ENSCHIP00000025974	ENSCHIP00000001693	Glyceraldehyde-3-phosphate dehydrogenase.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.482
GAPDH	TGFB1	ENSCHIP00000025974	ENSCHIP00000008885	Glyceraldehyde-3-phosphate dehydrogenase.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.860
GCSH	GLDC	ENSCHIP00000032144	ENSCHIP00000025237	Glycine cleavage system protein H.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.949
GCSH	PHGDH	ENSCHIP00000032144	ENSCHIP00000019405	Glycine cleavage system protein H.	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.478
GCSH	SHMT1	ENSCHIP00000032144	ENSCHIP00000011211	Glycine cleavage system protein H.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.732
GCSH	SHMT2	ENSCHIP00000032144	ENSCHIP00000001693	Glycine cleavage system protein H.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.758
GLDC	GCSH	ENSCHIP00000025237	ENSCHIP00000032144	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glycine cleavage system protein H.	0.949
GLDC	LOC108634030	ENSCHIP00000025237	ENSCHIP00000005825	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.994
GLDC	PHGDH	ENSCHIP00000025237	ENSCHIP00000019405	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.856
GLDC	SHMT1	ENSCHIP00000025237	ENSCHIP00000011211	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.998
GLDC	SHMT2	ENSCHIP00000025237	ENSCHIP00000001693	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.998
LOC108634030	GLDC	ENSCHIP00000005825	ENSCHIP00000025237	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.994
LOC108634030	PHGDH	ENSCHIP00000005825	ENSCHIP00000019405	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.478