27 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOXB2	Homeobox B2. (354 aa)
	HOXA2	Homeobox A2. (372 aa)
	PAX7	Paired box 7. (503 aa)
	HOXB5	Homeobox B5. (269 aa)
	TGFB2	Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	EMD	Emerin. (261 aa)
	BARD1	BRCA1 associated RING domain 1. (775 aa)
	AR	Androgen receptor. (891 aa)
	KIF11	Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1055 aa)
	CENPE	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2431 aa)
	HOXB7	Homeobox B7. (217 aa)
	HOXA3	Homeobox A3. (437 aa)
	MSC	Musculin. (198 aa)
	ACTB	Uncharacterized protein. (375 aa)
	TGFB1	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	PITX2	Homeobox protein. (325 aa)
	HOXD13	Homeobox D13. (340 aa)
	MYOD1	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)
	TBP	Uncharacterized protein. (327 aa)
	HOXC10	Homeobox C10. (342 aa)
	HOXA10	Homeobox A10. (413 aa)
	HOXA5	Homeobox A5. (270 aa)
	TGFB3	Transforming growth factor beta; Belongs to the TGF-beta family. (452 aa)
	TCF21	Transcription factor 21. (179 aa)
	HOXC4	Homeobox C4. (264 aa)
	HOXC13	Homeobox C13. (330 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	AR	ENSCHIP00000011080	ENSCHIP00000024342	Uncharacterized protein.	Androgen receptor.	0.792
ACTB	GAPDH	ENSCHIP00000011080	ENSCHIP00000025974	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.979
ACTB	MYOD1	ENSCHIP00000011080	ENSCHIP00000005799	Uncharacterized protein.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.660
ACTB	PAX7	ENSCHIP00000011080	ENSCHIP00000027759	Uncharacterized protein.	Paired box 7.	0.523
ACTB	TBP	ENSCHIP00000011080	ENSCHIP00000003904	Uncharacterized protein.	Uncharacterized protein.	0.876
ACTB	TGFB1	ENSCHIP00000011080	ENSCHIP00000008885	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.831
ACTB	TGFB2	ENSCHIP00000011080	ENSCHIP00000026276	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.533
AR	ACTB	ENSCHIP00000024342	ENSCHIP00000011080	Androgen receptor.	Uncharacterized protein.	0.792
AR	GAPDH	ENSCHIP00000024342	ENSCHIP00000025974	Androgen receptor.	Glyceraldehyde-3-phosphate dehydrogenase.	0.792
CENPE	KIF11	ENSCHIP00000018782	ENSCHIP00000019146	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.977
EMD	GAPDH	ENSCHIP00000025935	ENSCHIP00000025974	Emerin.	Glyceraldehyde-3-phosphate dehydrogenase.	0.430
EMD	MYOD1	ENSCHIP00000025935	ENSCHIP00000005799	Emerin.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.502
GAPDH	ACTB	ENSCHIP00000025974	ENSCHIP00000011080	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.979
GAPDH	AR	ENSCHIP00000025974	ENSCHIP00000024342	Glyceraldehyde-3-phosphate dehydrogenase.	Androgen receptor.	0.792
GAPDH	EMD	ENSCHIP00000025974	ENSCHIP00000025935	Glyceraldehyde-3-phosphate dehydrogenase.	Emerin.	0.430
GAPDH	HOXA10	ENSCHIP00000025974	ENSCHIP00000013381	Glyceraldehyde-3-phosphate dehydrogenase.	Homeobox A10.	0.424
GAPDH	MYOD1	ENSCHIP00000025974	ENSCHIP00000005799	Glyceraldehyde-3-phosphate dehydrogenase.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.790
GAPDH	PAX7	ENSCHIP00000025974	ENSCHIP00000027759	Glyceraldehyde-3-phosphate dehydrogenase.	Paired box 7.	0.738
GAPDH	TBP	ENSCHIP00000025974	ENSCHIP00000003904	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.879
GAPDH	TGFB1	ENSCHIP00000025974	ENSCHIP00000008885	Glyceraldehyde-3-phosphate dehydrogenase.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.860