27 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TLR3	Toll like receptor 3; Belongs to the Toll-like receptor family. (918 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	DDX17	DEAD-box helicase 17; Belongs to the DEAD box helicase family. (729 aa)
	HNRNPH1	Heterogeneous nuclear ribonucleoprotein H1. (463 aa)
	HNRNPH2	Uncharacterized protein. (449 aa)
	PABPC4	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
	PTBP1	Polypyrimidine tract binding protein 1. (557 aa)
	DAZL	RRM domain-containing protein. (295 aa)
	DKC1	Dyskerin pseudouridine synthase 1. (506 aa)
	TRIM10	Tripartite motif containing 10. (486 aa)
	KHDRBS3	KH RNA binding domain containing, signal transduction associated 3. (346 aa)
	HNRNPA3	Uncharacterized protein. (361 aa)
	LARP1	La ribonucleoprotein domain family member 1. (1144 aa)
	ELAVL1	ELAV-like protein; Belongs to the RRM elav family. (326 aa)
	ACTB	Uncharacterized protein. (375 aa)
	NOVA2	NOVA alternative splicing regulator 2. (550 aa)
	DIDO1	Death inducer-obliterator 1. (2207 aa)
	MYB	MYB proto-oncogene, transcription factor. (640 aa)
	GATA1	GATA binding protein 1. (413 aa)
	NFKB1	Nuclear factor kappa B subunit 1. (969 aa)
	AFF1	AF4/FMR2 family member 1. (1227 aa)
	CD34	Uncharacterized protein. (384 aa)
	FUS	FUS RNA binding protein. (522 aa)
	RBM38	RNA binding motif protein 38. (242 aa)
	TAL1	TAL bHLH transcription factor 1, erythroid differentiation factor. (328 aa)
	PABPC1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
	EIF4A3	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (411 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	CD34	ENSCHIP00000011080	ENSCHIP00000002645	Uncharacterized protein.	Uncharacterized protein.	0.812
ACTB	DAZL	ENSCHIP00000011080	ENSCHIP00000018466	Uncharacterized protein.	RRM domain-containing protein.	0.463
ACTB	FUS	ENSCHIP00000011080	ENSCHIP00000002026	Uncharacterized protein.	FUS RNA binding protein.	0.558
ACTB	GAPDH	ENSCHIP00000011080	ENSCHIP00000025974	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.979
ACTB	GATA1	ENSCHIP00000011080	ENSCHIP00000004852	Uncharacterized protein.	GATA binding protein 1.	0.523
ACTB	NFKB1	ENSCHIP00000011080	ENSCHIP00000004382	Uncharacterized protein.	Nuclear factor kappa B subunit 1.	0.406
ACTB	PTBP1	ENSCHIP00000011080	ENSCHIP00000018918	Uncharacterized protein.	Polypyrimidine tract binding protein 1.	0.421
ACTB	TLR3	ENSCHIP00000011080	ENSCHIP00000015102	Uncharacterized protein.	Toll like receptor 3; Belongs to the Toll-like receptor family.	0.737
AFF1	DIDO1	ENSCHIP00000004242	ENSCHIP00000006630	AF4/FMR2 family member 1.	Death inducer-obliterator 1.	0.445
CD34	ACTB	ENSCHIP00000002645	ENSCHIP00000011080	Uncharacterized protein.	Uncharacterized protein.	0.812
CD34	GAPDH	ENSCHIP00000002645	ENSCHIP00000025974	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.843
CD34	GATA1	ENSCHIP00000002645	ENSCHIP00000004852	Uncharacterized protein.	GATA binding protein 1.	0.720
CD34	TAL1	ENSCHIP00000002645	ENSCHIP00000028018	Uncharacterized protein.	TAL bHLH transcription factor 1, erythroid differentiation factor.	0.590
DAZL	ACTB	ENSCHIP00000018466	ENSCHIP00000011080	RRM domain-containing protein.	Uncharacterized protein.	0.463
DAZL	EIF4A3	ENSCHIP00000018466	ENSCHIP00000029017	RRM domain-containing protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.489
DAZL	GAPDH	ENSCHIP00000018466	ENSCHIP00000025974	RRM domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.457
DDX17	DKC1	ENSCHIP00000023972	ENSCHIP00000017633	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Dyskerin pseudouridine synthase 1.	0.728
DDX17	EIF4A3	ENSCHIP00000023972	ENSCHIP00000029017	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.724
DDX17	ELAVL1	ENSCHIP00000023972	ENSCHIP00000012648	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	ELAV-like protein; Belongs to the RRM elav family.	0.563
DDX17	FUS	ENSCHIP00000023972	ENSCHIP00000002026	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	FUS RNA binding protein.	0.556