STRINGSTRING
COL1A2 COL1A2 OMD OMD COL14A1 COL14A1 COL1A1 COL1A1 COL12A1 COL12A1 DCN DCN PXDN PXDN ASPN ASPN CASP3 CASP3 COL5A2 COL5A2 COL11A1 COL11A1 POSTN POSTN BGN BGN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL1A2Collagen type I alpha 2 chain. (1128 aa)
OMDOsteomodulin. (420 aa)
COL14A1Collagen type XIV alpha 1 chain. (1775 aa)
COL1A1Collagen type I alpha 1 chain. (1463 aa)
COL12A1Collagen type XII alpha 1 chain. (3046 aa)
DCNDecorin; May affect the rate of fibrils formation. (360 aa)
PXDNPeroxidasin. (1525 aa)
ASPNAsporin. (370 aa)
CASP3Caspase 3; Belongs to the peptidase C14A family. (275 aa)
COL5A2Collagen type V alpha 2 chain. (1252 aa)
COL11A1Collagen type XI alpha 1 chain. (1323 aa)
POSTNPeriostin. (836 aa)
BGNBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (373 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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