STRINGSTRING
SFPQ SFPQ MATR3 MATR3 TUBB TUBB TUBA1C TUBA1C DDX3X DDX3X SYNCRIP SYNCRIP HNRNPR HNRNPR NONO NONO IDH2 IDH2 DDX39B DDX39B HNRNPU HNRNPU PDIA6 PDIA6 IL6 IL6 SARNP SARNP YBX1 YBX1 RACK1 RACK1 ALYREF ALYREF HSP90AB1 HSP90AB1 PTBP1 PTBP1 DHX9 DHX9 DGCR8 DGCR8 HSPA9 HSPA9 ANXA1 ANXA1 HNRNPL HNRNPL DROSHA DROSHA HNRNPA2B1 HNRNPA2B1 SND1 SND1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFPQSplicing factor proline and glutamine rich. (711 aa)
MATR3Uncharacterized protein. (849 aa)
TUBBTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
TUBA1CTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
DDX3XUncharacterized protein; Belongs to the DEAD box helicase family. (661 aa)
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (623 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (622 aa)
NONONon-POU domain containing octamer binding. (470 aa)
IDH2Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (452 aa)
DDX39BDExD-box helicase 39B. (428 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)
PDIA6Protein disulfide isomerase family A member 6; Belongs to the protein disulfide isomerase family. (440 aa)
IL6Interleukin-6; Cytokine with a wide variety of biological functions. It is a potent inducer of the acute phase response. Plays an essential role in the final differentiation of B-cells into Ig-secreting cells Involved in lymphocyte and monocyte differentiation. Acts on B-cells, T-cells, hepatocytes, hematopoietic progenitor cells and cells of the CNS. Required for the generation of T(H)17 cells. Also acts as a myokine. It is discharged into the bloodstream after muscle contraction and acts to increase the breakdown of fats and to improve insulin resistance. It induces myeloma and plasm [...] (237 aa)
SARNPSAP domain containing ribonucleoprotein. (196 aa)
YBX1CSD_1 domain-containing protein. (324 aa)
RACK1Receptor for activated C kinase 1. (317 aa)
ALYREFAly/REF export factor. (267 aa)
HSP90AB1Heat shock protein 90 alpha family class B member 1. (724 aa)
PTBP1Polypyrimidine tract binding protein 1. (557 aa)
DHX9DExH-box helicase 9. (1271 aa)
DGCR8DGCR8 microprocessor complex subunit. (764 aa)
HSPA9Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family. (679 aa)
ANXA1Annexin. (346 aa)
HNRNPLUncharacterized protein. (616 aa)
DROSHADrosha ribonuclease III. (1371 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)
SND1Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (910 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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