20 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GPX7	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (186 aa)
	GOT1	Aspartate aminotransferase. (413 aa)
	GPX8	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
	NOX4	NADPH oxidase 4. (578 aa)
	MTHFD2	Uncharacterized protein. (352 aa)
	ENSCHIP00000023849	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (177 aa)
	GPX6	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (223 aa)
	NOX1	NADPH oxidase 1. (498 aa)
	ALB	Serum albumin. (608 aa)
	GSR	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (519 aa)
	BCL2	BH4_2 domain-containing protein. (229 aa)
	DHFR	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family. (187 aa)
	CASP3	Caspase 3; Belongs to the peptidase C14A family. (275 aa)
	ACTB	Uncharacterized protein. (375 aa)
	GOT2	Aspartate aminotransferase. (430 aa)
	CASP9	Caspase 9; Belongs to the peptidase C14A family. (452 aa)
	LOC102168954	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (219 aa)
	CYP2E1	Cytochrome P450 family 2 subfamily E member 1; Belongs to the cytochrome P450 family. (495 aa)
	LOC106501717	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (105 aa)
	LOC102173997	Capra hircus breed Kapro cytochrome c mRNA; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (105 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	ALB	ENSCHIP00000011080	ENSCHIP00000020234	Uncharacterized protein.	Serum albumin.	0.961
ACTB	BCL2	ENSCHIP00000011080	ENSCHIP00000015831	Uncharacterized protein.	BH4_2 domain-containing protein.	0.940
ACTB	CASP3	ENSCHIP00000011080	ENSCHIP00000011490	Uncharacterized protein.	Caspase 3; Belongs to the peptidase C14A family.	0.996
ACTB	CASP9	ENSCHIP00000011080	ENSCHIP00000008590	Uncharacterized protein.	Caspase 9; Belongs to the peptidase C14A family.	0.891
ACTB	CYP2E1	ENSCHIP00000011080	ENSCHIP00000000561	Uncharacterized protein.	Cytochrome P450 family 2 subfamily E member 1; Belongs to the cytochrome P450 family.	0.666
ACTB	ENSCHIP00000023849	ENSCHIP00000011080	ENSCHIP00000023849	Uncharacterized protein.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.718
ACTB	GOT1	ENSCHIP00000011080	ENSCHIP00000029101	Uncharacterized protein.	Aspartate aminotransferase.	0.779
ACTB	GOT2	ENSCHIP00000011080	ENSCHIP00000010968	Uncharacterized protein.	Aspartate aminotransferase.	0.779
ACTB	GPX6	ENSCHIP00000011080	ENSCHIP00000020908	Uncharacterized protein.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.704
ACTB	GPX7	ENSCHIP00000011080	ENSCHIP00000029981	Uncharacterized protein.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.717
ACTB	GPX8	ENSCHIP00000011080	ENSCHIP00000026386	Uncharacterized protein.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.717
ACTB	GSR	ENSCHIP00000011080	ENSCHIP00000016690	Uncharacterized protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.593
ACTB	LOC102168954	ENSCHIP00000011080	ENSCHIP00000004343	Uncharacterized protein.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.716
ACTB	LOC102173997	ENSCHIP00000011080	ENSCHIP00000031546	Uncharacterized protein.	Capra hircus breed Kapro cytochrome c mRNA; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.884
ACTB	LOC106501717	ENSCHIP00000011080	ENSCHIP00000032023	Uncharacterized protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.884
ACTB	NOX1	ENSCHIP00000011080	ENSCHIP00000020812	Uncharacterized protein.	NADPH oxidase 1.	0.673
ACTB	NOX4	ENSCHIP00000011080	ENSCHIP00000024501	Uncharacterized protein.	NADPH oxidase 4.	0.778
ALB	ACTB	ENSCHIP00000020234	ENSCHIP00000011080	Serum albumin.	Uncharacterized protein.	0.961
ALB	BCL2	ENSCHIP00000020234	ENSCHIP00000015831	Serum albumin.	BH4_2 domain-containing protein.	0.866
ALB	CASP3	ENSCHIP00000020234	ENSCHIP00000011490	Serum albumin.	Caspase 3; Belongs to the peptidase C14A family.	0.892