24 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102176799	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	PLAU	Plasminogen activator, urokinase. (440 aa)
	PTHLH	Parathyroid hormone-like protein. (177 aa)
	MMP12	Matrix metallopeptidase 12. (470 aa)
	COL4A2	Collagen type IV alpha 2 chain. (1607 aa)
	COL1A2	Collagen type I alpha 2 chain. (1128 aa)
	AKT3	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (481 aa)
	LTBP1	Latent transforming growth factor beta binding protein 1. (1491 aa)
	ETV4	ETS variant 4. (490 aa)
	MMP3	Matrix metallopeptidase 3. (477 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	COL4A1	Collagen type IV alpha 1 chain. (1608 aa)
	COL1A1	Collagen type I alpha 1 chain. (1463 aa)
	SERPINE1	Serpin family E member 1; Belongs to the serpin family. (402 aa)
	ALB	Serum albumin. (608 aa)
	SEMA3C	Semaphorin 3C; Belongs to the semaphorin family. (765 aa)
	MMP9	Uncharacterized protein. (709 aa)
	PXDN	Peroxidasin. (1525 aa)
	AKT2	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (482 aa)
	ACTB	Uncharacterized protein. (375 aa)
	ACTA1	Uncharacterized protein; Belongs to the actin family. (223 aa)
	LOC102181016	Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (318 aa)
	NELL2	Neural EGFL like 2. (818 aa)
	GAPDHS	Glyceraldehyde-3-phosphate dehydrogenase. (385 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTA1	COL1A1	ENSCHIP00000010728	ENSCHIP00000023918	Uncharacterized protein; Belongs to the actin family.	Collagen type I alpha 1 chain.	0.472
ACTA1	GAPDH	ENSCHIP00000010728	ENSCHIP00000025974	Uncharacterized protein; Belongs to the actin family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.634
ACTA1	GAPDHS	ENSCHIP00000010728	ENSCHIP00000005676	Uncharacterized protein; Belongs to the actin family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.433
ACTA1	LOC102176799	ENSCHIP00000010728	ENSCHIP00000004827	Uncharacterized protein; Belongs to the actin family.	Glyceraldehyde-3-phosphate dehydrogenase.	0.434
ACTA1	LOC102181016	ENSCHIP00000010728	ENSCHIP00000010405	Uncharacterized protein; Belongs to the actin family.	Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.415
ACTB	AKT2	ENSCHIP00000011080	ENSCHIP00000013931	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.720
ACTB	AKT3	ENSCHIP00000011080	ENSCHIP00000030504	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.590
ACTB	ALB	ENSCHIP00000011080	ENSCHIP00000020234	Uncharacterized protein.	Serum albumin.	0.961
ACTB	COL1A1	ENSCHIP00000011080	ENSCHIP00000023918	Uncharacterized protein.	Collagen type I alpha 1 chain.	0.776
ACTB	COL1A2	ENSCHIP00000011080	ENSCHIP00000031191	Uncharacterized protein.	Collagen type I alpha 2 chain.	0.563
ACTB	GAPDH	ENSCHIP00000011080	ENSCHIP00000025974	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.979
ACTB	GAPDHS	ENSCHIP00000011080	ENSCHIP00000005676	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.911
ACTB	LOC102176799	ENSCHIP00000011080	ENSCHIP00000004827	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.937
ACTB	LOC102181016	ENSCHIP00000011080	ENSCHIP00000010405	Uncharacterized protein.	Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.917
ACTB	MMP12	ENSCHIP00000011080	ENSCHIP00000032834	Uncharacterized protein.	Matrix metallopeptidase 12.	0.441
ACTB	MMP3	ENSCHIP00000011080	ENSCHIP00000026267	Uncharacterized protein.	Matrix metallopeptidase 3.	0.755
ACTB	MMP9	ENSCHIP00000011080	ENSCHIP00000016938	Uncharacterized protein.	Uncharacterized protein.	0.881
ACTB	PLAU	ENSCHIP00000011080	ENSCHIP00000000686	Uncharacterized protein.	Plasminogen activator, urokinase.	0.608
ACTB	PXDN	ENSCHIP00000011080	ENSCHIP00000015493	Uncharacterized protein.	Peroxidasin.	0.962
ACTB	SERPINE1	ENSCHIP00000011080	ENSCHIP00000023172	Uncharacterized protein.	Serpin family E member 1; Belongs to the serpin family.	0.634