STRINGSTRING
COL14A1 COL14A1 COL13A1 COL13A1 TGFB3 TGFB3 COL26A1 COL26A1 TGFB1 TGFB1 GOT2 GOT2 LOXL2 LOXL2 COL1A1 COL1A1 COL4A1 COL4A1 TGFB2 TGFB2 COL16A1 COL16A1 RXRA RXRA GOT1 GOT1 PDGFRB PDGFRB COL1A2 COL1A2 COL4A2 COL4A2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL14A1Collagen type XIV alpha 1 chain. (1775 aa)
COL13A1Collagen type XIII alpha 1 chain. (440 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (452 aa)
COL26A1Collagen type XXVI alpha 1 chain. (358 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
GOT2Aspartate aminotransferase. (430 aa)
LOXL2Lysyl oxidase like 2. (791 aa)
COL1A1Collagen type I alpha 1 chain. (1463 aa)
COL4A1Collagen type IV alpha 1 chain. (1608 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
COL16A1Collagen type XVI alpha 1 chain. (1414 aa)
RXRANR LBD domain-containing protein. (106 aa)
GOT1Aspartate aminotransferase. (413 aa)
PDGFRBPlatelet-derived growth factor receptor beta; Tyrosine-protein kinase that acts as cell-surface receptor for homodimeric PDGFB and PDGFD and for heterodimers formed by PDGFA and PDGFB, and plays an essential role in the regulation of embryonic development, cell proliferation, survival, differentiation, chemotaxis and migration. Plays an essential role in blood vessel development by promoting proliferation, migration and recruitment of pericytes and smooth muscle cells to endothelial cells. (1103 aa)
COL1A2Collagen type I alpha 2 chain. (1128 aa)
COL4A2Collagen type IV alpha 2 chain. (1607 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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