STRINGSTRING
PDGFRA PDGFRA LOC102182848 LOC102182848 KDR KDR LOC108636012 LOC108636012 H3-4 H3-4 LOC108634231 LOC108634231 LOC102180554 LOC102180554 ACTN2 ACTN2 LOC106503499 LOC106503499 LOC102189503 LOC102189503 LOC108633554 LOC108633554 GJA1 GJA1 LOC102185882 LOC102185882 CCDC80 CCDC80 LOC102191748 LOC102191748 KIT KIT ISL1 ISL1 IGFBP7 IGFBP7 SLIT2-2 SLIT2-2 SLIT2 SLIT2 LOC108633916 LOC108633916 CXCL12 CXCL12 INS INS LOC102171353 LOC102171353 LOC102169981 LOC102169981 CXCR4 CXCR4 MYL4 MYL4 PXDN PXDN TNNI1 TNNI1 MYH6 MYH6 NKX2-5 NKX2-5 ANKRD1 ANKRD1 VIM VIM TNNI3 TNNI3 ACTC1 ACTC1 TNNT2 TNNT2 POU5F1 POU5F1 SLC8A1 SLC8A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDGFRAPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1108 aa)
LOC102182848Histone H3; Belongs to the histone H3 family. (136 aa)
KDRKinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1390 aa)
LOC108636012Histone H3; Belongs to the histone H3 family. (136 aa)
H3-4Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108634231Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102180554Histone H3; Belongs to the histone H3 family. (136 aa)
ACTN2Actinin alpha 2. (902 aa)
LOC106503499Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102189503Histone H3; Belongs to the histone H3 family. (136 aa)
LOC108633554Histone domain-containing protein. (136 aa)
GJA1Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (382 aa)
LOC102185882Histone H3; Belongs to the histone H3 family. (136 aa)
CCDC80Coiled-coil domain containing 80. (948 aa)
LOC102191748Histone domain-containing protein. (136 aa)
KITMast/stem cell growth factor receptor Kit; Tyrosine-protein kinase that acts as cell-surface receptor for the cytokine KITLG/SCF and plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. In response to KITLG/SCF binding, KIT can activate several signaling pathways. Phosphorylates PIK3R1, PLCG1, SH2B2/APS and CBL. Activates the AKT1 signaling pathway by phosphorylation of PIK3R1, the regulatory subunit of phosphatidylinositol 3-kinase. Activat [...] (974 aa)
ISL1ISL LIM homeobox 1. (349 aa)
IGFBP7Insulin like growth factor binding protein 7. (282 aa)
SLIT2-2LRRNT domain-containing protein. (167 aa)
SLIT2Slit guidance ligand 2. (1457 aa)
LOC108633916Histone H3; Belongs to the histone H3 family. (136 aa)
CXCL12C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family. (116 aa)
INSInsulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (105 aa)
LOC102171353Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102169981Histone domain-containing protein. (136 aa)
CXCR4C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family. (353 aa)
MYL4Myosin light chain 4. (193 aa)
PXDNPeroxidasin. (1525 aa)
TNNI1Troponin I1, slow skeletal type. (187 aa)
MYH6Myosin heavy chain 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1943 aa)
NKX2-5NK2 homeobox 5. (323 aa)
ANKRD1Ankyrin repeat domain 1. (319 aa)
VIMVimentin; Belongs to the intermediate filament family. (471 aa)
TNNI3Uncharacterized protein. (228 aa)
ACTC1Actin alpha cardiac muscle 1. (377 aa)
TNNT2Troponin T2, cardiac type. (267 aa)
POU5F1POU domain protein. (360 aa)
SLC8A1Solute carrier family 8 member A1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (650 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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