7 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108633198	Uncharacterized protein. (310 aa)
	GOT1	Aspartate aminotransferase. (413 aa)
	LOC102184853	Uncharacterized protein; Belongs to the FGGY kinase family. (549 aa)
	ALB	Serum albumin. (608 aa)
	GK	Uncharacterized protein; Belongs to the FGGY kinase family. (472 aa)
	GK2	Glycerol kinase 2; Belongs to the FGGY kinase family. (554 aa)
	GOT2	Aspartate aminotransferase. (430 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALB	GOT1	ENSCHIP00000020234	ENSCHIP00000029101	Serum albumin.	Aspartate aminotransferase.	0.972
ALB	GOT2	ENSCHIP00000020234	ENSCHIP00000010968	Serum albumin.	Aspartate aminotransferase.	0.954
GK	LOC108633198	ENSCHIP00000023289	ENSCHIP00000023969	Uncharacterized protein; Belongs to the FGGY kinase family.	Uncharacterized protein.	0.952
GK2	LOC102184853	ENSCHIP00000007066	ENSCHIP00000015129	Glycerol kinase 2; Belongs to the FGGY kinase family.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.911
GK2	LOC108633198	ENSCHIP00000007066	ENSCHIP00000023969	Glycerol kinase 2; Belongs to the FGGY kinase family.	Uncharacterized protein.	0.912
GOT1	ALB	ENSCHIP00000029101	ENSCHIP00000020234	Aspartate aminotransferase.	Serum albumin.	0.972
GOT1	GOT2	ENSCHIP00000029101	ENSCHIP00000010968	Aspartate aminotransferase.	Aspartate aminotransferase.	0.983
GOT2	ALB	ENSCHIP00000010968	ENSCHIP00000020234	Aspartate aminotransferase.	Serum albumin.	0.954
GOT2	GOT1	ENSCHIP00000010968	ENSCHIP00000029101	Aspartate aminotransferase.	Aspartate aminotransferase.	0.983
LOC102184853	GK2	ENSCHIP00000015129	ENSCHIP00000007066	Uncharacterized protein; Belongs to the FGGY kinase family.	Glycerol kinase 2; Belongs to the FGGY kinase family.	0.911
LOC102184853	LOC108633198	ENSCHIP00000015129	ENSCHIP00000023969	Uncharacterized protein; Belongs to the FGGY kinase family.	Uncharacterized protein.	0.911
LOC108633198	GK	ENSCHIP00000023969	ENSCHIP00000023289	Uncharacterized protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.952
LOC108633198	GK2	ENSCHIP00000023969	ENSCHIP00000007066	Uncharacterized protein.	Glycerol kinase 2; Belongs to the FGGY kinase family.	0.912
LOC108633198	LOC102184853	ENSCHIP00000023969	ENSCHIP00000015129	Uncharacterized protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.911