STRINGSTRING
BRCA2 BRCA2 FANCC FANCC MUS81 MUS81 HLTF HLTF SMARCAL1 SMARCAL1 RBX1 RBX1 ZRANB3 ZRANB3 CUL1 CUL1 EME1 EME1 FANCM FANCM NSMCE4A NSMCE4A EXO1 EXO1 SMC6 SMC6 EEF1A1 EEF1A1 NEDD8 NEDD8 LOC108636537 LOC108636537 ENSCHIP00000003677 ENSCHIP00000003677 FANCA FANCA FANCI FANCI FANCD2 FANCD2 BRCA1 BRCA1 FBH1 FBH1 NSMCE2 NSMCE2 EEF1A2 EEF1A2 ENSCHIP00000016659 ENSCHIP00000016659 SLX4 SLX4 SMC5 SMC5 DNA2 DNA2 NSMCE1 NSMCE1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BRCA2BRCA2 DNA repair associated. (3405 aa)
FANCCFanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. (568 aa)
MUS81MUS81 structure-specific endonuclease subunit. (552 aa)
HLTFHelicase like transcription factor. (1011 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (930 aa)
RBX1RING-type domain-containing protein. (108 aa)
ZRANB3Zinc finger RANBP2-type containing 3. (1070 aa)
CUL1CULLIN_2 domain-containing protein; Belongs to the cullin family. (776 aa)
EME1Essential meiotic structure-specific endonuclease 1. (580 aa)
FANCMFA complementation group M. (2043 aa)
NSMCE4ANon-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (413 aa)
EXO1Exonuclease 1. (835 aa)
SMC6Structural maintenance of chromosomes 6. (1116 aa)
EEF1A1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
NEDD8NEDD8 ubiquitin like modifier. (77 aa)
LOC108636537Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (441 aa)
ENSCHIP00000003677Tr-type G domain-containing protein. (438 aa)
FANCAFA complementation group A. (1416 aa)
FANCIFA complementation group I. (1086 aa)
FANCD2FA complementation group D2. (1423 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1843 aa)
FBH1F-box DNA helicase 1. (1048 aa)
NSMCE2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (277 aa)
EEF1A2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (463 aa)
ENSCHIP00000016659Tr-type G domain-containing protein. (120 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1752 aa)
SMC5AAA_23 domain-containing protein. (1104 aa)
DNA2DNA replication helicase/nuclease 2. (1062 aa)
NSMCE1NSE1 homolog, SMC5-SMC6 complex component. (266 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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