36 items (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GLUD1	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (561 aa)
	DDO	D-aspartate oxidase. (341 aa)
	GLS	Glutaminase. (673 aa)
	GOT2	Aspartate aminotransferase. (430 aa)
	FOLH1	Folate hydrolase 1. (750 aa)
	ASNS	Asparagine synthetase [glutamine-hydrolyzing]. (561 aa)
	IL4I1	Interleukin 4 induced 1. (582 aa)
	ENSCHIP00000013297	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (219 aa)
	GOT1L1	Glutamic-oxaloacetic transaminase 1 like 1. (404 aa)
	RIMKLA	Ribosomal modification protein rimK like family member A. (391 aa)
	ASL	Uncharacterized protein. (473 aa)
	NAT8L	N-acetyltransferase 8 like. (293 aa)
	ALDH4A1	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (576 aa)
	ADSL	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (490 aa)
	GPT	Glutamic--pyruvic transaminase. (496 aa)
	GAD1	Glutamate decarboxylase 1. (594 aa)
	ADSS1	Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (457 aa)
	ADSS2	Adenylosuccinate synthetase isozyme 2; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (456 aa)
	ALDH5A1	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (510 aa)
	LOC102183203	Amine oxidase. (517 aa)
	GAD2	Glutamate decarboxylase 2. (585 aa)
	LOC102176752	Uncharacterized protein. (539 aa)
	GFPT1	Glutamine--fructose-6-phosphate transaminase 1. (699 aa)
	ABAT	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)
	AGXT2	Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (517 aa)
	CAD	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase. (2242 aa)
	AGXT	Serine--pyruvate aminotransferase. (414 aa)
	RIMKLB	Ribosomal modification protein rimK like family member B. (386 aa)
	GOT1	Aspartate aminotransferase. (413 aa)
	ASRGL1	Asparaginase and isoaspartyl peptidase 1. (309 aa)
	CPS1	Carbamoyl-phosphate synthase 1. (1500 aa)
	NIT2	Nitrilase family member 2. (283 aa)
	GLUL	Glutamine synthetase. (373 aa)
	ASPA	Aspartoacylase. (313 aa)
	GFPT2	Glutamine-fructose-6-phosphate transaminase 2. (676 aa)
	GPT2	Glutamic--pyruvic transaminase 2. (523 aa)

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABAT	AGXT	ENSCHIP00000025460	ENSCHIP00000025932	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Serine--pyruvate aminotransferase.	0.531
ABAT	AGXT2	ENSCHIP00000025460	ENSCHIP00000025513	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.935
ABAT	ALDH4A1	ENSCHIP00000025460	ENSCHIP00000015660	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.539
ABAT	ALDH5A1	ENSCHIP00000025460	ENSCHIP00000022698	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.991
ABAT	ASL	ENSCHIP00000025460	ENSCHIP00000014908	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.442
ABAT	DDO	ENSCHIP00000025460	ENSCHIP00000001123	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	D-aspartate oxidase.	0.445
ABAT	GAD1	ENSCHIP00000025460	ENSCHIP00000018351	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate decarboxylase 1.	0.965
ABAT	GAD2	ENSCHIP00000025460	ENSCHIP00000023476	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate decarboxylase 2.	0.963
ABAT	GLUD1	ENSCHIP00000025460	ENSCHIP00000000388	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.738
ABAT	GOT1	ENSCHIP00000025460	ENSCHIP00000029101	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Aspartate aminotransferase.	0.523
ABAT	GOT1L1	ENSCHIP00000025460	ENSCHIP00000013967	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamic-oxaloacetic transaminase 1 like 1.	0.421
ABAT	LOC102176752	ENSCHIP00000025460	ENSCHIP00000023551	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.986
ABAT	NIT2	ENSCHIP00000025460	ENSCHIP00000030722	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Nitrilase family member 2.	0.473
ADSL	ADSS1	ENSCHIP00000015977	ENSCHIP00000019145	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.993
ADSL	ADSS2	ENSCHIP00000015977	ENSCHIP00000021002	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	Adenylosuccinate synthetase isozyme 2; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.996
ADSL	ASL	ENSCHIP00000015977	ENSCHIP00000014908	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	Uncharacterized protein.	0.935
ADSL	ENSCHIP00000013297	ENSCHIP00000015977	ENSCHIP00000013297	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.	0.997
ADSS1	ADSL	ENSCHIP00000019145	ENSCHIP00000015977	Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.993
ADSS1	ADSS2	ENSCHIP00000019145	ENSCHIP00000021002	Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Adenylosuccinate synthetase isozyme 2; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.901
ADSS1	ASL	ENSCHIP00000019145	ENSCHIP00000014908	Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Uncharacterized protein.	0.509