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POLB POLB POLL POLL APEX1 APEX1 POLE POLE UNG UNG NEIL3 NEIL3 FEN1 FEN1 POLD2 POLD2 MBD4 MBD4 SMUG1 SMUG1 MUTYH MUTYH POLD4 POLD4 TDG TDG PCNA PCNA PARP3 PARP3 PARP4 PARP4 PARP1 PARP1 HMGB1 HMGB1 POLD1 POLD1 APEX2 APEX2 POLE3 POLE3 XRCC1 XRCC1 NEIL1 NEIL1 OGG1 OGG1 POLD3 POLD3 POLE4 POLE4 LIG1 LIG1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
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POLBDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (335 aa)
POLLDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (594 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2281 aa)
UNGUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (311 aa)
NEIL3Nei like DNA glycosylase 3. (606 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
POLD2DNA polymerase delta 2, accessory subunit. (469 aa)
MBD4Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. (554 aa)
SMUG1Single-strand-selective monofunctional uracil-DNA glycosylase 1. (324 aa)
MUTYHAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (605 aa)
POLD4Uncharacterized protein. (132 aa)
TDGThymine DNA glycosylase. (403 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
PARP3Poly [ADP-ribose] polymerase. (525 aa)
PARP4Poly [ADP-ribose] polymerase. (1739 aa)
PARP1Poly [ADP-ribose] polymerase. (1020 aa)
HMGB1Uncharacterized protein. (215 aa)
POLD1DNA polymerase. (1115 aa)
APEX2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (514 aa)
POLE3CBFD_NFYB_HMF domain-containing protein. (147 aa)
XRCC1X-ray repair cross complementing 1. (632 aa)
NEIL1Nei like DNA glycosylase 1. (390 aa)
OGG18-oxoguanine DNA glycosylase. (345 aa)
POLD3Uncharacterized protein. (464 aa)
POLE4DNA polymerase epsilon 4, accessory subunit. (131 aa)
LIG1DNA ligase. (915 aa)
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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