STRINGSTRING
yjdL yjdL yqgA yqgA yjdC yjdC cutA cutA fxsA fxsA yjeI yjeI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yjdLPutative POT family, di-/tripeptide transport protein; Similar to E. coli putative peptide transporter (AAC77091.1); Blastp hit to AAC77091.1 (485 aa), 80% identity in aa 1 - 484. (486 aa)
yqgASimilar to E. coli putative transport protein (AAC76003.1); Blastp hit to AAC76003.1 (235 aa), 83% identity in aa 1 - 235. (235 aa)
yjdCPutative merR family bacterial regulatory protein; Similar to E. coli orf, hypothetical protein (AAC77095.1); Blastp hit to AAC77095.1 (199 aa), 88% identity in aa 9 - 199. (191 aa)
cutAPutative periplasmic divalent cation tolerance protein; Involved in resistance toward heavy metals. Belongs to the CutA family. (115 aa)
fxsASuppresses F exclusion of bacteriophage T7; Similar to E. coli orf, hypothetical protein (AAC77100.1); Blastp hit to AAC77100.1 (125 aa), 92% identity in aa 1 - 125. (171 aa)
yjeIPutative outer membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC77104.1); Blastp hit to AAC77104.1 (128 aa), 89% identity in aa 6 - 128. (123 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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