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napC napC napB napB napH napH napG napG napA napA napD napD napF napF torD torD torA torA torC torC torR torR torT torT torS torS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
napCPeriplasmic nitrate reductase; Cytochrome c-type biogenesis protein; similar to E. coli cytochrome c-type protein (AAC75262.1); Blastp hit to AAC75262.1 (200 aa), 88% identity in aa 1 - 200. (200 aa)
napBPeriplasmic small subunit nitrate reductase of cytochrome C550; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (149 aa)
napHFerredoxin-type protein; Electron transfer; similar to E. coli ferredoxin-type protein: electron transfer (AAC75264.1); Blastp hit to AAC75264.1 (287 aa), 88% identity in aa 1 - 280. (289 aa)
napGFerredoxin-type protein; Electron transfer; similar to E. coli ferredoxin-type protein: electron transfer (AAC75265.1); Blastp hit to AAC75265.1 (231 aa), 94% identity in aa 1 - 231. (231 aa)
napAPeriplasmic large subunit nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (828 aa)
napDPeriplasmic nitrate reductase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. (87 aa)
napFFerredoxin-type protein; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. (163 aa)
torDCytoplasmic chaperone which interacts with TorA; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily. (210 aa)
torATrimethylamine N-oxide reductase subunit; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. (850 aa)
torCTrimethylamine N-oxide reductase; Cytochrome c-type subunit; also has activity as negativer regulator of tor operon; similar to E. coli trimethylamine N-oxide reductase, cytochrome c-type subunit (AAC74081.1); Blastp hit to AAC74081.1 (390 aa), 90% identity in aa 1 - 388; Belongs to the TorC/TorY family. (394 aa)
torRTwo-component system, OmpR family, torCAD operon response regulator TorR; Regulates tor operon (TorR family); similar to E. coli response transcriptional regulator for torA (sensor TorS) (AAC74080.1); Blastp hit to AAC74080.1 (230 aa), 81% identity in aa 1 - 229. (230 aa)
torTTMAO reductase system periplasmic protein TorT; Regulates tor operon; similar to E. coli part of regulation of tor operon, periplasmic (AAC74079.1); Blastp hit to AAC74079.1 (342 aa), 65% identity in aa 1 - 342. (346 aa)
torSHistidine kinase; Regulates tor operon; similar to E. coli sensor protein torS (regulator TorR) (AAC74078.1); Blastp hit to AAC74078.1 (904 aa), 62% identity in aa 1 - 896. (911 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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