STRINGSTRING
STM1026 STM1026 STM1055 STM1055 pipA pipA STM2139 STM2139 STM2585 STM2585 STM2614 STM2614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STM1026Gifsy-2 prophage protein. (170 aa)
STM1055Gifsy-2 prophage protein; Hypothetical protein (gi|5410522). (228 aa)
pipAPathogenicity island encoded protein: SPI5. (226 aa)
STM2139Putative inner membrane protein. (111 aa)
STM2585Gifsy-1 prophage protein; Similar to transposase. (181 aa)
STM2614Gifsy-1 prophage protein. (228 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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