STRINGSTRING
yajI yajI ybjM ybjM yceK yceK solA solA ydhK ydhK ydhJ ydhJ ydhI ydhI acpD acpD STM1672 STM1672 ytfK ytfK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yajIPutative outer membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73515.1); Blastp hit to AAC73515.1 (199 aa), 73% identity in aa 21 - 199. (179 aa)
ybjMPutative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73935.1); Blastp hit to AAC73935.1 (125 aa), 72% identity in aa 1 - 125. (125 aa)
yceKPutative outer membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74134.1); Blastp hit to AAC74134.1 (75 aa), 86% identity in aa 1 - 75. (75 aa)
solAPutative sarcosine oxidase; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan; Belongs to the MSOX/MTOX family. MTOX subfamily. (372 aa)
ydhKPutative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC74717.1); Blastp hit to AAC74717.1 (670 aa), 84% identity in aa 1 - 669. (679 aa)
ydhJPutative multidrug resistance efflux pump; Similar to E. coli putative membrane protein (AAC74716.1); Blastp hit to AAC74716.1 (299 aa), 83% identity in aa 9 - 299; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (298 aa)
ydhIPutative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC74715.1); Blastp hit to AAC74715.1 (78 aa), 76% identity in aa 1 - 78. (78 aa)
acpDAcyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (201 aa)
STM1672Putative cytoplasmic protein. (369 aa)
ytfKPutative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC77174.1); Blastp hit to AAC77174.1 (81 aa), 90% identity in aa 1 - 81. (90 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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