5 items (Salmonella enterica Typhimurium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STM3125	Putative cytoplasmic protein. (185 aa)
	STM3126	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415. (499 aa)
	STM3127	Putative cytoplasmic protein. (124 aa)
	STM3128	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414. (433 aa)
	STM3129	Similar to E. coli phenylacetaldehyde dehydrogenase (AAC74467.1); Blastp hit to AAC74467.1 (500 aa), 44% identity in aa 7 - 500. (494 aa)

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
STM3125	STM3126	Putative cytoplasmic protein.	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	0.850
STM3125	STM3127	Putative cytoplasmic protein.	Putative cytoplasmic protein.	0.449
STM3125	STM3128	Putative cytoplasmic protein.	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	0.483
STM3126	STM3125	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Putative cytoplasmic protein.	0.850
STM3126	STM3127	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Putative cytoplasmic protein.	0.470
STM3126	STM3128	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	0.677
STM3126	STM3129	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Similar to E. coli phenylacetaldehyde dehydrogenase (AAC74467.1); Blastp hit to AAC74467.1 (500 aa), 44% identity in aa 7 - 500.	0.556
STM3127	STM3125	Putative cytoplasmic protein.	Putative cytoplasmic protein.	0.449
STM3127	STM3126	Putative cytoplasmic protein.	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	0.470
STM3127	STM3128	Putative cytoplasmic protein.	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	0.814
STM3127	STM3129	Putative cytoplasmic protein.	Similar to E. coli phenylacetaldehyde dehydrogenase (AAC74467.1); Blastp hit to AAC74467.1 (500 aa), 44% identity in aa 7 - 500.	0.582
STM3128	STM3125	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	Putative cytoplasmic protein.	0.483
STM3128	STM3126	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	0.677
STM3128	STM3127	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	Putative cytoplasmic protein.	0.814
STM3128	STM3129	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	Similar to E. coli phenylacetaldehyde dehydrogenase (AAC74467.1); Blastp hit to AAC74467.1 (500 aa), 44% identity in aa 7 - 500.	0.635
STM3129	STM3126	Similar to E. coli phenylacetaldehyde dehydrogenase (AAC74467.1); Blastp hit to AAC74467.1 (500 aa), 44% identity in aa 7 - 500.	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	0.556
STM3129	STM3127	Similar to E. coli phenylacetaldehyde dehydrogenase (AAC74467.1); Blastp hit to AAC74467.1 (500 aa), 44% identity in aa 7 - 500.	Putative cytoplasmic protein.	0.582
STM3129	STM3128	Similar to E. coli phenylacetaldehyde dehydrogenase (AAC74467.1); Blastp hit to AAC74467.1 (500 aa), 44% identity in aa 7 - 500.	Similar to E. coli probable oxidoreductase (AAC74383.1); Blastp hit to AAC74383.1 (426 aa), 35% identity in aa 7 - 414.	0.635

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