STRINGSTRING
STM0035 STM0035 STM0036 STM0036 STM0037 STM0037 STM0038 STM0038 STM0084 STM0084 yajO yajO STM0886 STM0886 STM1287 STM1287 STM1632 STM1632 yebO yebO cspB cspB STM1999 STM1999 STM3085 STM3085 yqgB yqgB yqgC yqgC STM3122 STM3122 STM3124 STM3124 STM3154 STM3154 STM3155 STM3155 STM3156 STM3156 yidF yidF yidG yidG yidH yidH STM3966 STM3966 ytfL ytfL ytgA ytgA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STM0035Similar to E. coli putative sulfatase (AAC76701.1); Blastp hit to AAC76701.1 (497 aa), 26% identity in aa 2 - 420. (497 aa)
STM0036Similar to E. coli putative arylsulfatase regulator (AAC76803.1); Blastp hit to AAC76803.1 (411 aa), 46% identity in aa 8 - 401. (396 aa)
STM0037Putative cytoplasmic protein. (417 aa)
STM0038Putative arylsulfatase. (571 aa)
STM0084Similar to E. coli putative sulfatase (AAC76701.1); Blastp hit to AAC76701.1 (497 aa), 31% identity in aa 251 - 345, 31% identity in aa 5 - 103, 45% identity in aa 400 - 431. (629 aa)
yajOPutative oxidoreductase / K + channel protein; Similar to E. coli putative NAD(P)H-dependent xylose reductase (AAC73522.1); Blastp hit to AAC73522.1 (348 aa), 92% identity in aa 25 - 348. (324 aa)
STM0886Similar to E. coli putative sulfatase (AAC76701.1); Blastp hit to AAC76701.1 (497 aa), 25% identity in aa 7 - 358, 26% identity in aa 401 - 446. (495 aa)
STM1287Similar to E. coli putative arylsulfatase regulator (AAC76803.1); Blastp hit to AAC76803.1 (411 aa), 46% identity in aa 10 - 401. (398 aa)
STM1632Putative inner membrane protein. (114 aa)
yebOPutative periplasmic or exported protein; Similar to E. coli orf, hypothetical protein (AAC74895.1); Blastp hit to AAC74895.1 (95 aa), 73% identity in aa 1 - 95. (95 aa)
cspBPutative cold-shock protein; Similar to E. coli cold shock-like protein (AAC74625.1); Blastp hit to AAC74625.1 (70 aa), 84% identity in aa 1 - 70. (70 aa)
STM1999Putative cytoplasmic protein. (53 aa)
STM3085Putative outer membrane lipoprotein. (243 aa)
yqgBPutative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC75976.1); Blastp hit to AAC75976.1 (48 aa), 73% identity in aa 6 - 46. (43 aa)
yqgCPutative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC75977.1); Blastp hit to AAC75977.1 (71 aa), 78% identity in aa 1 - 51. (54 aa)
STM3122Similar to E. coli putative sulfatase (AAC74571.1); Blastp hit to AAC74571.1 (571 aa), 27% identity in aa 120 - 327, 43% identity in aa 322 - 358, 37% identity in aa 44 - 86, 31% identity in aa 435 - 471. (579 aa)
STM3124Putative response regulator; Contains a CheY-like receiver domain and a HTH DNA-binding domain; similar to E. coli putative regulator (AAC76545.1); Blastp hit to AAC76545.1 (200 aa), 48% identity in aa 138 - 200. (227 aa)
STM3154Putative ATP-dependent RNA helicase-like protein. (171 aa)
STM3155Putative cytoplasmic protein. (136 aa)
STM3156Putative cytoplasmic protein. (134 aa)
yidFPutative cytoplasmic protein; Similar to E. coli putative transcriptional regulator (AAC76697.1); Blastp hit to AAC76697.1 (165 aa), 48% identity in aa 1 - 165. (176 aa)
yidGPutative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC76698.1); Blastp hit to AAC76698.1 (120 aa), 82% identity in aa 1 - 116. (120 aa)
yidHPutative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC76699.1); Blastp hit to AAC76699.1 (115 aa), 94% identity in aa 1 - 115. (115 aa)
STM3966Similar to E. coli putative arylsulfatase regulator (AAC76803.1); Blastp hit to AAC76803.1 (411 aa), 47% identity in aa 11 - 402. (447 aa)
ytfLSimilar to E. coli putative transport protein (AAC77175.1); Blastp hit to AAC77175.1 (447 aa), 91% identity in aa 1 - 447. (447 aa)
ytgAPutative inner membrane protein; Hypothetical 17.8 kKa protein in miaE 3'region (ORF 17.8). (SW:YTGA_SALTY). (162 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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