STRINGSTRING
STM1053 STM1053 STM1054 STM1054 STM2704 STM2704 STM2705 STM2705 STM2706 STM2706
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STM1053Gifsy-2 prophage protein; Similar to E. coli orf, hypothetical protein (AAC74998.1); Blastp hit to AAC74998.1 (217 aa), 85% identity in aa 1 - 178; Belongs to the SOS response-associated peptidase family. (208 aa)
STM1054Gifsy-2 prophage protein; Hypothetical protein (gi|5410523). (99 aa)
STM2704Fels-2 prophage protein; Similar to genes in P2-like phages; unknown (gi|2852345). (135 aa)
STM2705Fels-2 prophage protein. (205 aa)
STM2706Fels-2 prophage protein; Similar to tail fiber protein in phage P2. (524 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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