Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rof | yaeP | STM0237 | STM0238 | Modulator of Rho-dependent transcription termination; Similar to E. coli orf, hypothetical protein (AAC73300.1); Blastp hit to AAC73300.1 (86 aa), 81% identity in aa 1 - 86. | Putative cytoplasmic protein; Belongs to the UPF0253 family. | 0.835 |
| yacC | yaeP | STM0167 | STM0238 | Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73233.1); Blastp hit to AAC73233.1 (156 aa), 95% identity in aa 42 - 156. | Putative cytoplasmic protein; Belongs to the UPF0253 family. | 0.891 |
| yacC | ybfN | STM0167 | STM0688 | Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73233.1); Blastp hit to AAC73233.1 (156 aa), 95% identity in aa 42 - 156. | Putative lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73776.1); Blastp hit to AAC73776.1 (108 aa), 84% identity in aa 1 - 107. | 0.896 |
| yaeP | rof | STM0238 | STM0237 | Putative cytoplasmic protein; Belongs to the UPF0253 family. | Modulator of Rho-dependent transcription termination; Similar to E. coli orf, hypothetical protein (AAC73300.1); Blastp hit to AAC73300.1 (86 aa), 81% identity in aa 1 - 86. | 0.835 |
| yaeP | yacC | STM0238 | STM0167 | Putative cytoplasmic protein; Belongs to the UPF0253 family. | Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73233.1); Blastp hit to AAC73233.1 (156 aa), 95% identity in aa 42 - 156. | 0.891 |
| yaeP | ybfN | STM0238 | STM0688 | Putative cytoplasmic protein; Belongs to the UPF0253 family. | Putative lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73776.1); Blastp hit to AAC73776.1 (108 aa), 84% identity in aa 1 - 107. | 0.760 |
| ybfM | ybfN | STM0687 | STM0688 | Putative outer membrane protein; Involved in the uptake of chitosugars. | Putative lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73776.1); Blastp hit to AAC73776.1 (108 aa), 84% identity in aa 1 - 107. | 0.897 |
| ybfN | yacC | STM0688 | STM0167 | Putative lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73776.1); Blastp hit to AAC73776.1 (108 aa), 84% identity in aa 1 - 107. | Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73233.1); Blastp hit to AAC73233.1 (156 aa), 95% identity in aa 42 - 156. | 0.896 |
| ybfN | yaeP | STM0688 | STM0238 | Putative lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73776.1); Blastp hit to AAC73776.1 (108 aa), 84% identity in aa 1 - 107. | Putative cytoplasmic protein; Belongs to the UPF0253 family. | 0.760 |
| ybfN | ybfM | STM0688 | STM0687 | Putative lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73776.1); Blastp hit to AAC73776.1 (108 aa), 84% identity in aa 1 - 107. | Putative outer membrane protein; Involved in the uptake of chitosugars. | 0.897 |