STRINGSTRING
yieG yieG STM3631 STM3631 yicE yicE yjcD yjcD ybbY ybbY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yieGPutative xanthine/uracil permeases family; Similar to E. coli putative membrane / transport protein (AAC76737.1); Blastp hit to AAC76737.1 (445 aa), 96% identity in aa 1 - 445. (487 aa)
STM3631Similar to E. coli putative permease (AAC75926.1); Blastp hit to AAC75926.1 (505 aa), 27% identity in aa 54 - 466. (441 aa)
yicESimilar to E. coli putative transport protein (AAC76678.1); Blastp hit to AAC76678.1 (463 aa), 95% identity in aa 1 - 462. (463 aa)
yjcDPutative xanthine/uracil permease family; Similar to E. coli orf, hypothetical protein (AAC77034.1); Blastp hit to AAC77034.1 (449 aa), 97% identity in aa 1 - 449. (449 aa)
ybbYSimilar to E. coli putative transport (AAC73615.1); Blastp hit to AAC73615.1 (435 aa), 79% identity in aa 8 - 435. (432 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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