(6 nodes) Prosthetic group biosynthetic process network (Salmonella enterica Typhimurium)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	citX	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179. (183 aa)
	STM0769	Putative cytoplasmic protein. (232 aa)
	citX2	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167. (183 aa)
	citG2	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 47% identity in aa 1 - 290. (302 aa)
	citG	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 77% identity in aa 1 - 292. (298 aa)
	STM3350	Putative inner membrane protein. (243 aa)

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
STM0769	citX	STM0769	STM0620	Putative cytoplasmic protein.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	0.448
STM0769	citX2	STM0769	STM0062	Putative cytoplasmic protein.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	0.449
STM3350	citX	STM3350	STM0620	Putative inner membrane protein.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	0.448
STM3350	citX2	STM3350	STM0062	Putative inner membrane protein.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	0.462
citG	citG2	STM0619	STM0063	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 77% identity in aa 1 - 292.	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 47% identity in aa 1 - 290.	0.913
citG	citX	STM0619	STM0620	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 77% identity in aa 1 - 292.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	0.999
citG	citX2	STM0619	STM0062	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 77% identity in aa 1 - 292.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	0.987
citG2	citG	STM0063	STM0619	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 47% identity in aa 1 - 290.	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 77% identity in aa 1 - 292.	0.913
citG2	citX	STM0063	STM0620	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 47% identity in aa 1 - 290.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	0.994
citG2	citX2	STM0063	STM0062	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 47% identity in aa 1 - 290.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	0.997
citX	STM0769	STM0620	STM0769	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	Putative cytoplasmic protein.	0.448
citX	STM3350	STM0620	STM3350	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	Putative inner membrane protein.	0.448
citX	citG	STM0620	STM0619	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 77% identity in aa 1 - 292.	0.999
citX	citG2	STM0620	STM0063	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 47% identity in aa 1 - 290.	0.994
citX	citX2	STM0620	STM0062	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	0.911
citX2	STM0769	STM0062	STM0769	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	Putative cytoplasmic protein.	0.449
citX2	STM3350	STM0062	STM3350	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	Putative inner membrane protein.	0.462
citX2	citG	STM0062	STM0619	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 77% identity in aa 1 - 292.	0.987
citX2	citG2	STM0062	STM0063	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	Putative modifier of citrate lyase protein; Similar to E. coli orf, hypothetical protein (AAC73714.1); Blastp hit to AAC73714.1 (292 aa), 47% identity in aa 1 - 290.	0.997
citX2	citX	STM0062	STM0620	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 46% identity in aa 12 - 167.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73715.1); Blastp hit to AAC73715.1 (183 aa), 75% identity in aa 1 - 179.	0.911

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