STRINGSTRING
pduW pduW pduV pduV pta pta eutR eutR eutK eutK eutL eutL eutC eutC eutB eutB eutA eutA eutG eutG eutJ eutJ eutN eutN eutM eutM eutD eutD eutQ eutQ eutP eutP eutS eutS yfhC yfhC ygiD ygiD ygiE ygiE ribB ribB tdcD tdcD pduF pduF pduA pduA pudB pudB pduC pduC pduD pduD pduE pduE pduJ pduJ pduK pduK pduL pduL pduM pduM pduN pduN pduO pduO pduP pduP pduT pduT pduU pduU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pduWProbable propionate kinase. (SW:PDUW_SALTY); Belongs to the acetokinase family. PduW subfamily. (404 aa)
pduVPropanediol utilization protein PDUV. (SW:PDUV_SALTY). (150 aa)
ptaPhosphotransacetylase; Involved in acetate metabolism. Catalyzes the reversible interconversion of acetyl-CoA and acetyl phosphate. The direction of the overall reaction changes depending on growth conditions. Required for acetate recapture but not for acetate excretion when this organism is grown on ethanolamine; In the N-terminal section; belongs to the CobB/CobQ family. (714 aa)
eutRPutative regulator ethanolamine operon; Activates the transcription of the eut operon. Also positively regulates its own transcription. Probably binds ethanolamine and vitamin B12 as effectors. (350 aa)
eutKPutative carboxysome structural protein; May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place; Belongs to the bacterial microcompartments protein family. (164 aa)
eutLPutative carboxysome structural protein; May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place; Belongs to the EutL/PduB family. (219 aa)
eutCEthanolamine ammonia-lyase, light chain; Catalyzes the deamination of various vicinal amino-alcohols to oxo compounds. (298 aa)
eutBEthanolamine ammonia-lyase, heavy chain; Catalyzes the deamination of various vicinal amino-alcohols to oxo compounds. (453 aa)
eutACPPZ-55 prophage protein; May protect the EutBC lyase from inhibition. (467 aa)
eutGPutative transport protein in ethanolamine utilization; May act on the acetaldehyde produced from the degradation of ethanolamine; Belongs to the iron-containing alcohol dehydrogenase family. (395 aa)
eutJPutative heatshock protein (Hsp70); Ethanolamine utilization protein EUTJ. (SW:EUTJ_SALTY). (279 aa)
eutNPutative detox protein in ethanolamine utilization; May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place; To cyanobacterial carbon dioxide concentrating mechanism protein CcmL. (99 aa)
eutMPutative detox protein in ethanolamine utilization; May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place; Belongs to the bacterial microcompartments protein family. (96 aa)
eutDEthanolamine utilization protein EUTD. (SW:EUTD_SALTY). (338 aa)
eutQEthanolamine utilization protein EUTQ. (SW:EUTQ_SALTY). (229 aa)
eutPEthanolamine utilization protein EUTP. (SW:EUTP_SALTY). (159 aa)
eutSPutative ethanol utilization carboxysome structural protein; May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place; Belongs to the EutS/PduU family. (111 aa)
yfhCPutative cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (183 aa)
ygiDPutative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC76075.1); Blastp hit to AAC76075.1 (271 aa), 86% identity in aa 6 - 271. (276 aa)
ygiEPutative divalent heavy-metal cations transporter; Mediates zinc uptake. May also transport other divalent cations such as copper and cadmium ions (By similarity); Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily. (257 aa)
ribB3,4 dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (217 aa)
tdcDPropionate kinase; Catalyzes the conversion of propionyl phosphate and ADP to propionate and ATP. It can also use acetyl phosphate as phosphate group acceptor; Belongs to the acetokinase family. TdcD subfamily. (402 aa)
pduFPropanediol utilization protein; May facilitate the diffusion of propanediol; Belongs to the MIP/aquaporin (TC 1.A.8) family. (264 aa)
pduAPolyhedral bodies; propanediol utilization protein PDUA. (SW:PDUA_SALTY). (94 aa)
pudBPolyhedral bodies; propanediol utilization protein PDUB. (SW:PDUB_SALTY). (233 aa)
pduCPropanediol utilization dehydratase, large subunit; Part of the PduCDE complex that catalyzes the dehydration of 1,2-propanediol to propionaldehyde. Is required for S.typhimurium growth on 1,2-propanediol as the sole carbon and energy source. (554 aa)
pduDPropanediol utilization dehydratase, medium subunit; Part of the PduCDE complex that catalyzes the dehydration of 1,2-propanediol to propionaldehyde. Is required for S.typhimurium growth on 1,2-propanediol as the sole carbon and energy source. (224 aa)
pduEPropanediol utilization dehydratase, small subunit; Part of the PduCDE complex that catalyzes the dehydration of 1,2-propanediol to propionaldehyde. Is required for S.typhimurium growth on 1,2-propanediol as the sole carbon and energy source; Belongs to the diol/glycerol dehydratase small subunit family. (173 aa)
pduJPropanediol utilization protein; Polyhedral bodies; similar to E. coli detox protein (AAC75510.1); Blastp hit to AAC75510.1 (111 aa), 64% identity in aa 17 - 101. (91 aa)
pduKPropanediol utilization protein; Polyhedral bodies; similar to E. coli detox protein (AAC75510.1); Blastp hit to AAC75510.1 (111 aa), 35% identity in aa 9 - 92. (160 aa)
pduLPropanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. Is also able to catalyze the reverse reaction. To a lesser extent, also displays phosphate acetyltransferase activity. Belongs to the PduL family. (210 aa)
pduMPropanediol utilization protein. (163 aa)
pduNPropanediol utilization protein; Polyhedral bodies; similar to E. coli detox protein (AAC75509.1); Blastp hit to AAC75509.1 (95 aa), 43% identity in aa 1 - 83. (91 aa)
pduOPropanediol utilization B12 related protein; Belongs to the Cob(I)alamin adenosyltransferase family. (336 aa)
pduPPropanediol utilization CoA-dependent propionaldehyde dehydrogenase; Similar to E. coli ethanolamine utilization; similar to acetaldehyde dehydrogenase (AAC75508.1); Blastp hit to AAC75508.1 (467 aa), 45% identity in aa 1 - 466. (464 aa)
pduTPropanediol utilization protein; Polyhedral bodies; similar to E. coli detox protein (AAC75510.1); Blastp hit to AAC75510.1 (111 aa), 41% identity in aa 16 - 93, 31% identity in aa 16 - 90. (184 aa)
pduUPolyhedral bodies; propanediol utilization protein PDUU. (SW:PDUU_SALTY). (116 aa)
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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