4 items (Salmonella enterica Typhimurium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Input:
	ygbM	Putative endonuclease; Similar to E. coli orf, hypothetical protein (AAC75781.1); Blastp hit to AAC75781.1 (258 aa), 79% identity in aa 1 - 258; Belongs to the hyi family. (258 aa)
	ygbJ	Similar to E. coli putative dehydrogenase (AAC75778.1); Blastp hit to AAC75778.1 (302 aa), 82% identity in aa 1 - 299. (307 aa)
	ygbK	Putative tRNA synthase; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. Belongs to the four-carbon acid sugar kinase family. (420 aa)
	ygbI	Putative regulatory protein, deoR family; Similar to E. coli putative DEOR-type transcriptional regulator (AAC75777.1); Blastp hit to AAC75777.1 (265 aa), 86% identity in aa 11 - 263. (254 aa)

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ygbI	ygbJ	STM2919	STM2918	Putative regulatory protein, deoR family; Similar to E. coli putative DEOR-type transcriptional regulator (AAC75777.1); Blastp hit to AAC75777.1 (265 aa), 86% identity in aa 11 - 263.	Similar to E. coli putative dehydrogenase (AAC75778.1); Blastp hit to AAC75778.1 (302 aa), 82% identity in aa 1 - 299.	0.976
ygbI	ygbK	STM2919	STM2917	Putative regulatory protein, deoR family; Similar to E. coli putative DEOR-type transcriptional regulator (AAC75777.1); Blastp hit to AAC75777.1 (265 aa), 86% identity in aa 11 - 263.	Putative tRNA synthase; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. Belongs to the four-carbon acid sugar kinase family.	0.963
ygbI	ygbM	STM2919	STM2915	Putative regulatory protein, deoR family; Similar to E. coli putative DEOR-type transcriptional regulator (AAC75777.1); Blastp hit to AAC75777.1 (265 aa), 86% identity in aa 11 - 263.	Putative endonuclease; Similar to E. coli orf, hypothetical protein (AAC75781.1); Blastp hit to AAC75781.1 (258 aa), 79% identity in aa 1 - 258; Belongs to the hyi family.	0.959
ygbJ	ygbI	STM2918	STM2919	Similar to E. coli putative dehydrogenase (AAC75778.1); Blastp hit to AAC75778.1 (302 aa), 82% identity in aa 1 - 299.	Putative regulatory protein, deoR family; Similar to E. coli putative DEOR-type transcriptional regulator (AAC75777.1); Blastp hit to AAC75777.1 (265 aa), 86% identity in aa 11 - 263.	0.976
ygbJ	ygbK	STM2918	STM2917	Similar to E. coli putative dehydrogenase (AAC75778.1); Blastp hit to AAC75778.1 (302 aa), 82% identity in aa 1 - 299.	Putative tRNA synthase; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. Belongs to the four-carbon acid sugar kinase family.	0.999
ygbJ	ygbM	STM2918	STM2915	Similar to E. coli putative dehydrogenase (AAC75778.1); Blastp hit to AAC75778.1 (302 aa), 82% identity in aa 1 - 299.	Putative endonuclease; Similar to E. coli orf, hypothetical protein (AAC75781.1); Blastp hit to AAC75781.1 (258 aa), 79% identity in aa 1 - 258; Belongs to the hyi family.	0.997
ygbK	ygbI	STM2917	STM2919	Putative tRNA synthase; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. Belongs to the four-carbon acid sugar kinase family.	Putative regulatory protein, deoR family; Similar to E. coli putative DEOR-type transcriptional regulator (AAC75777.1); Blastp hit to AAC75777.1 (265 aa), 86% identity in aa 11 - 263.	0.963
ygbK	ygbJ	STM2917	STM2918	Putative tRNA synthase; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. Belongs to the four-carbon acid sugar kinase family.	Similar to E. coli putative dehydrogenase (AAC75778.1); Blastp hit to AAC75778.1 (302 aa), 82% identity in aa 1 - 299.	0.999
ygbK	ygbM	STM2917	STM2915	Putative tRNA synthase; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. Belongs to the four-carbon acid sugar kinase family.	Putative endonuclease; Similar to E. coli orf, hypothetical protein (AAC75781.1); Blastp hit to AAC75781.1 (258 aa), 79% identity in aa 1 - 258; Belongs to the hyi family.	0.998
ygbM	ygbI	STM2915	STM2919	Putative endonuclease; Similar to E. coli orf, hypothetical protein (AAC75781.1); Blastp hit to AAC75781.1 (258 aa), 79% identity in aa 1 - 258; Belongs to the hyi family.	Putative regulatory protein, deoR family; Similar to E. coli putative DEOR-type transcriptional regulator (AAC75777.1); Blastp hit to AAC75777.1 (265 aa), 86% identity in aa 11 - 263.	0.959
ygbM	ygbJ	STM2915	STM2918	Putative endonuclease; Similar to E. coli orf, hypothetical protein (AAC75781.1); Blastp hit to AAC75781.1 (258 aa), 79% identity in aa 1 - 258; Belongs to the hyi family.	Similar to E. coli putative dehydrogenase (AAC75778.1); Blastp hit to AAC75778.1 (302 aa), 82% identity in aa 1 - 299.	0.997
ygbM	ygbK	STM2915	STM2917	Putative endonuclease; Similar to E. coli orf, hypothetical protein (AAC75781.1); Blastp hit to AAC75781.1 (258 aa), 79% identity in aa 1 - 258; Belongs to the hyi family.	Putative tRNA synthase; Catalyzes the ATP-dependent phosphorylation of 3-oxo- tetronate to 3-oxo-tetronate 4-phosphate. Belongs to the four-carbon acid sugar kinase family.	0.998

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