(18 nodes) Neddylation, and Ubiquitin-conjugating enzyme E2 network (Vittaforma corneae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VICG_02194	Uncharacterized protein. (159 aa)
	VICG_01901	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
	VICG_01958	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (138 aa)
	VICG_01503	Uncharacterized protein. (427 aa)
	VICG_01853	UBIQUITIN_CONJUGAT_2 domain-containing protein. (190 aa)
	VICG_01858	RING-type domain-containing protein. (103 aa)
	VICG_01668	Ubiquitin-like domain-containing protein. (266 aa)
	VICG_01165	Uncharacterized protein. (150 aa)
	VICG_01695	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	VICG_01312	UBA_e1_C domain-containing protein. (942 aa)
	VICG_00831	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (95 aa)
	VICG_00449	Ubiquitin-like domain-containing protein. (77 aa)
	VICG_00542	VPS9 domain-containing protein. (271 aa)
	VICG_00510	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
	VICG_00308	WD_REPEATS_REGION domain-containing protein. (399 aa)
	VICG_00151	ThiF domain-containing protein. (280 aa)
	VICG_00536	AN1-type domain-containing protein. (117 aa)
	VICG_00359	Uncharacterized protein. (802 aa)

Your Current Organism:

Vittaforma corneae

NCBI taxonomy Id: 993615
Other names: V. corneae ATCC 50505, Vittaforma corneae ATCC 50505

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VICG_00151	VICG_00308	L2GPR9	L2GNZ2	ThiF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.657
VICG_00151	VICG_00359	L2GPR9	L2GQM2	ThiF domain-containing protein.	Uncharacterized protein.	0.898
VICG_00151	VICG_00449	L2GPR9	L2GND6	ThiF domain-containing protein.	Ubiquitin-like domain-containing protein.	0.999
VICG_00151	VICG_00510	L2GPR9	L2GNJ7	ThiF domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.839
VICG_00151	VICG_00536	L2GPR9	L2GQ32	ThiF domain-containing protein.	AN1-type domain-containing protein.	0.966
VICG_00151	VICG_00831	L2GPR9	L2GMR4	ThiF domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.747
VICG_00151	VICG_01165	L2GPR9	L2GLP7	ThiF domain-containing protein.	Uncharacterized protein.	0.839
VICG_00151	VICG_01312	L2GPR9	L2GM29	ThiF domain-containing protein.	UBA_e1_C domain-containing protein.	0.999
VICG_00151	VICG_01668	L2GPR9	L2GLB1	ThiF domain-containing protein.	Ubiquitin-like domain-containing protein.	0.659
VICG_00151	VICG_01695	L2GPR9	L2GLZ8	ThiF domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.854
VICG_00151	VICG_01853	L2GPR9	L2GKL4	ThiF domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.736
VICG_00151	VICG_01858	L2GPR9	L2GKN5	ThiF domain-containing protein.	RING-type domain-containing protein.	0.874
VICG_00151	VICG_01901	L2GPR9	L2GJR8	ThiF domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.780
VICG_00151	VICG_01958	L2GPR9	L2GK41	ThiF domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.975
VICG_00151	VICG_02194	L2GPR9	L2GJF4	ThiF domain-containing protein.	Uncharacterized protein.	0.690
VICG_00308	VICG_00151	L2GNZ2	L2GPR9	WD_REPEATS_REGION domain-containing protein.	ThiF domain-containing protein.	0.657
VICG_00308	VICG_00359	L2GNZ2	L2GQM2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.966
VICG_00308	VICG_00449	L2GNZ2	L2GND6	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.807
VICG_00308	VICG_00510	L2GNZ2	L2GNJ7	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.631
VICG_00308	VICG_00536	L2GNZ2	L2GQ32	WD_REPEATS_REGION domain-containing protein.	AN1-type domain-containing protein.	0.786