(14 nodes) Negative regulation of translation network (Vittaforma corneae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VICG_01632	Proline-tRNA ligase. (500 aa)
	VICG_00445	Uncharacterized protein. (1474 aa)
	VICG_00158	RPOL4c domain-containing protein. (114 aa)
	VICG_00148	KH_dom_type_1 domain-containing protein. (224 aa)
	VICG_00704	Nudix hydrolase domain-containing protein. (243 aa)
	VICG_00929	WD_REPEATS_REGION domain-containing protein. (204 aa)
	VICG_00938	Uncharacterized protein. (142 aa)
	VICG_00886	NOT2_3_5 domain-containing protein. (203 aa)
	VICG_01026	Uncharacterized protein. (259 aa)
	VICG_01338	NOT2_3_5 domain-containing protein. (160 aa)
	VICG_01577	Uncharacterized protein. (214 aa)
	VICG_01656	S1 domain-containing protein. (194 aa)
	VICG_02169	Uncharacterized protein. (110 aa)
	VICG_01891	PUM-HD domain-containing protein. (467 aa)

Your Current Organism:

Vittaforma corneae

NCBI taxonomy Id: 993615
Other names: V. corneae ATCC 50505, Vittaforma corneae ATCC 50505

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VICG_00148	VICG_00704	L2GPL5	L2GNV8	KH_dom_type_1 domain-containing protein.	Nudix hydrolase domain-containing protein.	0.787
VICG_00148	VICG_01577	L2GPL5	L2GM12	KH_dom_type_1 domain-containing protein.	Uncharacterized protein.	0.999
VICG_00148	VICG_01656	L2GPL5	L2GK75	KH_dom_type_1 domain-containing protein.	S1 domain-containing protein.	0.999
VICG_00445	VICG_00704	L2GPU7	L2GNV8	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.530
VICG_00445	VICG_00886	L2GPU7	L2GN44	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.997
VICG_00445	VICG_01026	L2GPU7	L2GN08	Uncharacterized protein.	Uncharacterized protein.	0.999
VICG_00445	VICG_01338	L2GPU7	L2GM90	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.998
VICG_00445	VICG_01891	L2GPU7	L2GJR0	Uncharacterized protein.	PUM-HD domain-containing protein.	0.540
VICG_00445	VICG_02169	L2GPU7	L2GJV0	Uncharacterized protein.	Uncharacterized protein.	0.920
VICG_00704	VICG_00148	L2GNV8	L2GPL5	Nudix hydrolase domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.787
VICG_00704	VICG_00445	L2GNV8	L2GPU7	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.530
VICG_00704	VICG_00938	L2GNV8	L2GNB5	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.615
VICG_00704	VICG_01338	L2GNV8	L2GM90	Nudix hydrolase domain-containing protein.	NOT2_3_5 domain-containing protein.	0.561
VICG_00704	VICG_01577	L2GNV8	L2GM12	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.738
VICG_00704	VICG_01656	L2GNV8	L2GK75	Nudix hydrolase domain-containing protein.	S1 domain-containing protein.	0.701
VICG_00704	VICG_01891	L2GNV8	L2GJR0	Nudix hydrolase domain-containing protein.	PUM-HD domain-containing protein.	0.434
VICG_00886	VICG_00445	L2GN44	L2GPU7	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.997
VICG_00886	VICG_00929	L2GN44	L2GNM2	NOT2_3_5 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.553
VICG_00886	VICG_01026	L2GN44	L2GN08	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.995
VICG_00886	VICG_01338	L2GN44	L2GM90	NOT2_3_5 domain-containing protein.	NOT2_3_5 domain-containing protein.	0.997