STRINGSTRING
KRN99071.1 KRN99071.1 KRN99076.1 KRN99076.1 KRN99077.1 KRN99077.1 KRN99109.1 KRN99109.1 KRN98977.1 KRN98977.1 murE murE KRN98709.1 KRN98709.1 KRO00493.1 KRO00493.1 KRO00549.1 KRO00549.1 KRO00552.1 KRO00552.1 murB murB KRN98002.1 KRN98002.1 murI murI murA murA murF murF KRN97926.1 KRN97926.1 KRN97934.1 KRN97934.1 KRO00319.1 KRO00319.1 KRO00332.1 KRO00332.1 KRN97587.1 KRN97587.1 murA-2 murA-2 KRN97085.1 KRN97085.1 KRN97088.1 KRN97088.1 KRO00209.1 KRO00209.1 KRO00232.1 KRO00232.1 KRO00233.1 KRO00233.1 sepF sepF ftsZ ftsZ ftsA ftsA divIB divIB murG murG murD murD mraY mraY KRO00241.1 KRO00241.1 KRO00242.1 KRO00242.1 rsmH rsmH mraZ mraZ KRO00246.1 KRO00246.1 KRO00247.1 KRO00247.1 KRO00248.1 KRO00248.1 KRO00249.1 KRO00249.1 KRO00250.1 KRO00250.1 KRO00251.1 KRO00251.1 KRN96323.1 KRN96323.1 KRN99847.1 KRN99847.1 KRN99848.1 KRN99848.1 KRN99706.1 KRN99706.1 KRN99740.1 KRN99740.1 murC murC KRN99798.1 KRN99798.1 KRN99629.1 KRN99629.1 ddl ddl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRN99071.1Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. (385 aa)
KRN99076.1Amidase. (238 aa)
KRN99077.1Amidase. (276 aa)
KRN99109.1Hypothetical protein. (337 aa)
KRN98977.1D-alanyl-D-alanine carboxypeptidase precursor; Belongs to the peptidase S11 family. (413 aa)
murEUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. (498 aa)
KRN98709.1Glycosyltransferase Family 51 candidate bifunctional family GT51 b-glycosyltransferase PBP transpeptidase (candidate murein polymerase). (958 aa)
KRO00493.1N-acetylmuramoyl-L-alanine amidase. (437 aa)
KRO00549.1Bifunctional glycosyltransferase transpeptidase penicillin-binding protein 1A. (797 aa)
KRO00552.1Cell division protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. (228 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (299 aa)
KRN98002.1Cell wall-associated glycoside hydrolase (NLP P60 protein). (454 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (275 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (426 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (454 aa)
KRN97926.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (370 aa)
KRN97934.1Hypothetical protein. (130 aa)
KRO00319.1Lipoprotein. (297 aa)
KRO00332.1Amidase. (320 aa)
KRN97587.1NLP P60 protein. (239 aa)
murA-2UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (440 aa)
KRN97085.1Rod shape-determining protein MreB. (329 aa)
KRN97088.1Cell division membrane protein; Belongs to the SEDS family. (400 aa)
KRO00209.1Cell division membrane protein; Belongs to the SEDS family. (374 aa)
KRO00232.1Cell-division initiation protein (septum placement). (247 aa)
KRO00233.1S4 domain-containing protein. (264 aa)
sepFCell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (137 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (417 aa)
ftsACell division protein, FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (447 aa)
divIBCell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. (199 aa)
murGUndecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (369 aa)
murDUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (457 aa)
mraYphospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (321 aa)
KRO00241.1Cell division protein FtsI penicillin-binding protein 2. (722 aa)
KRO00242.1Hypothetical protein. (121 aa)
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (316 aa)
mraZCell division protein MraZ; Belongs to the MraZ family. (143 aa)
KRO00246.1Septum formation-inhibiting ATPase, ATPase ParA-type. (265 aa)
KRO00247.1Septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization. (222 aa)
KRO00248.1Rod shape-determining protein MreD. (180 aa)
KRO00249.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (287 aa)
KRO00250.1Rod shape-determining protein MreB. (333 aa)
KRO00251.1Hypothetical protein; Belongs to the UPF0758 family. (212 aa)
KRN96323.1Bifunctional glycosyltransferase transpeptidase penicillin-binding protein 1B. (871 aa)
KRN99847.1Hypothetical protein. (491 aa)
KRN99848.1Secreted SH3 domain protein. (407 aa)
KRN99706.1Autolysin. (423 aa)
KRN99740.1Bifunctional glycolsyltransferase transpeptidase penicillin binding protein 2A. (690 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (443 aa)
KRN99798.1Bifuntional dimerization transpeptidase. (666 aa)
KRN99629.1Xre-like DNA-binding protein. (282 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (351 aa)
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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