STRINGSTRING
VRK1 VRK1 BANF1 BANF1 SYNE1 SYNE1 EMD EMD LMNA LMNA MECP2 MECP2 CASP6 CASP6 SUN1 SUN1 ANKLE2 ANKLE2 TMPO TMPO CCDC155 CCDC155 LMNB2 LMNB2 SYNE3 SYNE3 SUN2 SUN2 STBD1 STBD1 LBR LBR BANF2 BANF2 LMNB1 LMNB1 SYNE2 SYNE2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VRK1VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. (396 aa)
BANF1Barrier to autointegration factor 1. (89 aa)
SYNE1Spectrin repeat containing nuclear envelope protein 1. (8803 aa)
EMDEmerin. (206 aa)
LMNALamin A/C; Belongs to the intermediate filament family. (658 aa)
MECP2Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (482 aa)
CASP6Caspase 6; Belongs to the peptidase C14A family. (299 aa)
SUN1Sad1 and UNC84 domain containing 1. (814 aa)
ANKLE2Ankyrin repeat and LEM domain containing 2. (975 aa)
TMPOLEM domain-containing protein. (366 aa)
CCDC155Coiled-coil domain containing 155. (564 aa)
LMNB2Lamin B2; Belongs to the intermediate filament family. (539 aa)
SYNE3Spectrin repeat containing nuclear envelope family member 3. (976 aa)
SUN2Sad1 and UNC84 domain containing 2. (804 aa)
STBD1Starch binding domain 1. (274 aa)
LBRLamin B receptor. (622 aa)
BANF2Barrier to autointegration factor 2. (90 aa)
LMNB1Lamin B1; Belongs to the intermediate filament family. (586 aa)
SYNE2Spectrin repeat containing nuclear envelope protein 2. (6879 aa)
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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