STRINGSTRING
AEA72080.1 AEA72080.1 AEA68042.1 AEA68042.1 AEA69193.1 AEA69193.1 AEA69536.1 AEA69536.1 AEA69537.1 AEA69537.1 AEA69538.1 AEA69538.1 AEA69539.1 AEA69539.1 AEA69540.1 AEA69540.1 AEA69541.1 AEA69541.1 AEA69542.1 AEA69542.1 AEA69543.1 AEA69543.1 AEA69545.1 AEA69545.1 AEA69544.1 AEA69544.1 AEA69546.1 AEA69546.1 AEA69628.1 AEA69628.1 AEA69629.1 AEA69629.1 AEA69634.1 AEA69634.1 AEA69638.1 AEA69638.1 AEA69640.1 AEA69640.1 secB secB AEA70092.1 AEA70092.1 tatC tatC secA secA AEA66621.1 AEA66621.1 secY secY AEA66658.1 AEA66658.1 AEA71609.1 AEA71609.1 AEA71612.1 AEA71612.1 ftsY ftsY AEA71874.1 AEA71874.1 AEA71876.1 AEA71876.1 AEA71880.1 AEA71880.1 AEA71885.1 AEA71885.1 AEA71886.1 AEA71886.1 AEA71887.1 AEA71887.1 AEA71888.1 AEA71888.1 AEA71889.1 AEA71889.1 AEA71892.1 AEA71892.1 AEA71894.1 AEA71894.1 AEA71895.1 AEA71895.1 AEA71933.1 AEA71933.1 AEA72079.1 AEA72079.1 AEA72082.1 AEA72082.1 AEA72083.1 AEA72083.1 AEA72085.1 AEA72085.1 AEA72086.1 AEA72086.1 AEA72090.1 AEA72090.1 AEA72096.1 AEA72096.1 AEA72097.1 AEA72097.1 yidC yidC AEA66790.1 AEA66790.1 yajC yajC secD secD secF secF ffh ffh tatA tatA AEA68846.1 AEA68846.1 tatB tatB secE secE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEA72080.1Putative phosphatase. (243 aa)
AEA68042.1Conserved hypothetical protein. (468 aa)
AEA69193.1Conserved hypothetical protein. (741 aa)
AEA69536.1Putative type II secretion system protein F. (403 aa)
AEA69537.1Putative type II secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (472 aa)
AEA69538.1Putative type II secretion pathway protein D precursor. (786 aa)
AEA69539.1Putative general secretory pathway protein. (192 aa)
AEA69540.1Putative general secretory pathway protein L. (390 aa)
AEA69541.1General secretion pathway protein K. (329 aa)
AEA69542.1Putative type II secretion pathway protein G precursor, putative pseudopilin. (149 aa)
AEA69543.1General secretory pathway protein I/V. (125 aa)
AEA69545.1Putative general secretory pathway protein H/U. (150 aa)
AEA69544.1Putative type II secretion system membrane protein C. (156 aa)
AEA69546.1Putative general secretion pathway protein J. (203 aa)
AEA69628.1Conserved hypothetical protein. (1274 aa)
AEA69629.1Conserved hypothetical protein. (253 aa)
AEA69634.1Hemolysin co-regulated protein; type VI secretion system effector. (165 aa)
AEA69638.1Chaperone; Belongs to the ClpA/ClpB family. (847 aa)
AEA69640.1Putative type VI secretion system, Vgr family. (669 aa)
secBSec protein secretion system, subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (160 aa)
AEA70092.1Putative type VI secretion system effector, Hcp1 family. (172 aa)
tatCTwin-arginine translocation system, TatC protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (265 aa)
secAPutative Sec protein secretion system, subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (911 aa)
AEA66621.1Putative type VI secretion system, Vgr family. (685 aa)
secYPutative Sec protein secretion system, subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (428 aa)
AEA66658.1Conserved hypothetical protein; putative outer membrane protein. (479 aa)
AEA71609.1Putative type IV secretion system protein virB5. (243 aa)
AEA71612.1Putative type IV secretion system protein virB6. (350 aa)
ftsYPutative signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (477 aa)
AEA71874.1Putative type III secretion protein. (295 aa)
AEA71876.1Putative type III secretion protein. (197 aa)
AEA71880.1Putative type III secretion protein. (716 aa)
AEA71885.1Putative type III secretion protein, putative membrane protein. (366 aa)
AEA71886.1Putative type III secretion protein. (265 aa)
AEA71887.1Putative type III secretion protein. (84 aa)
AEA71888.1Putative type III secretion protein. (217 aa)
AEA71889.1Putative type III secretion protein. (367 aa)
AEA71892.1Putative type III secretion protein. (452 aa)
AEA71894.1Putative type III secretion protein, putative membrane protein. (695 aa)
AEA71895.1Putative type III secretion protein. (375 aa)
AEA71933.1Putative secretion protein, ATP-binding component. (594 aa)
AEA72079.1Putative serine/threonine protein kinase. (1032 aa)
AEA72082.1Conserved hypothetical protein. (1166 aa)
AEA72083.1Conserved hypothetical protein. (436 aa)
AEA72085.1Conserved hypothetical protein; putative lipoprotein. (168 aa)
AEA72086.1Conserved hypothetical protein. (513 aa)
AEA72090.1Hemolysin co-regulated protein; type VI secretion system effector. (162 aa)
AEA72096.1Putative chaperone; Belongs to the ClpA/ClpB family. (896 aa)
AEA72097.1Putative type VI secretion system, Vgr family. (645 aa)
yidCPutative Sec protein secretion system, subunit YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (560 aa)
AEA66790.1Conserved hypothetical protein. (435 aa)
yajCPutative Sec protein secretion system, subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (112 aa)
secDPutative Sec protein secretion system, subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (622 aa)
secFPutative Sec protein secretion system, subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (304 aa)
ffhSignal recognition particle protein (From sprot); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the indivi [...] (458 aa)
tatATwin-arginine translocation system, TatA protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (95 aa)
AEA68846.1Conserved hypothetical protein. (442 aa)
tatBTwin-arginine translocation system, TatB protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (140 aa)
secEPutative Sec protein secretion system, subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (122 aa)
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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