STRINGSTRING
psbT psbT psb28 psb28 psbF psbF psbL psbL psbK psbK AFY31235.1 AFY31235.1 psbJ psbJ AFY35530.1 AFY35530.1 AFY35364.1 AFY35364.1 thf1 thf1 AFY33835.1 AFY33835.1 psbZ psbZ psbI psbI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psbTPhotosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. (35 aa)
psb28PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; HAMAP: Photosystem II Psb28, class 1; InterPro IPR005610; KEGG: naz:Aazo_0705 photosystem II reaction center protein Psb28; PFAM: Photosystem II Psb28, class 1; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: Photosystem II Psb28, class 1; Belongs to the Psb28 family. (112 aa)
psbFCytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (46 aa)
psbLPhotosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. (40 aa)
psbKPhotosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (45 aa)
AFY31235.1TIGRFAM: photosystem II protein PsbQ; InterPro IPR017487; KEGG: ava:Ava_5036 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Photosystem II PsbQ, cyanobacteria. (149 aa)
psbJPhotosystem II reaction center protein J; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (40 aa)
AFY35530.1PFAM: S4 domain; TIGRFAM: photosystem II S4 domain protein; COGs: COG2302 conserved hypothetical protein contains S4-like domain; InterPro IPR002942:IPR017506; KEGG: npu:Npun_R2882 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: RNA-binding S4 domain protein; TIGRFAM: Photosystem II S4. (259 aa)
AFY35364.1PFAM: PemK-like protein; KEGG: mar:MAE_62740 MazE/toxin transcriptional modulator MazF protein; SPTR: Putative uncharacterized protein. (109 aa)
thf1Protein thf1; May be involved in photosynthetic membrane biogenesis. (235 aa)
AFY33835.1PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: npu:Npun_R1240 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein. (245 aa)
psbZPhotosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa)
psbIPhotosystem II reaction center protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (38 aa)
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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