STRINGSTRING
FN1 FN1 LOC100352102 LOC100352102 ENSOCUP00000045925 ENSOCUP00000045925 ENSOCUP00000044284 ENSOCUP00000044284 ENSOCUP00000041840 ENSOCUP00000041840 ENSOCUP00000037329 ENSOCUP00000037329 CTNNB1 CTNNB1 LOC103345451 LOC103345451 CDH1 CDH1 CDH2 CDH2 SNAI1 SNAI1 TWIST2 TWIST2 SNAI2 SNAI2 C11orf68 C11orf68 CDH5 CDH5 G1SV95_RABIT G1SV95_RABIT ZEB1 ZEB1 KDR KDR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FN1Fibronectin; Fibronectins bind cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin. Fibronectins are involved in cell adhesion, cell motility, opsonization, wound healing, and maintenance of cell shape. Involved in osteoblast compaction through the fibronectin fibrillogenesis cell-mediated matrix assembly process, essential for osteoblast mineralization. Participates in the regulation of type I collagen deposition by osteoblasts (By similarity). (2427 aa)
LOC100352102Uncharacterized protein. (256 aa)
ENSOCUP00000045925TGFb_propeptide domain-containing protein. (272 aa)
ENSOCUP00000044284TGFb_propeptide domain-containing protein. (260 aa)
ENSOCUP00000041840TGFb_propeptide domain-containing protein. (219 aa)
ENSOCUP00000037329TGFb_propeptide domain-containing protein. (263 aa)
CTNNB1Catenin beta 1. (741 aa)
LOC103345451TGFb_propeptide domain-containing protein. (203 aa)
CDH1Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins. (884 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (854 aa)
SNAI1Snail family transcriptional repressor 1. (238 aa)
TWIST2Twist family bHLH transcription factor 2. (160 aa)
SNAI2Uncharacterized protein. (268 aa)
C11orf68Chromosome 11 open reading frame 68. (289 aa)
CDH5Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. (974 aa)
G1SV95_RABITTransforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
ZEB1Zinc finger E-box binding homeobox 1. (1080 aa)
KDRUncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1356 aa)
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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