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MMP13 MMP13 ADAMTS5 ADAMTS5 SOX9 SOX9 RUNX2 RUNX2 ADAMTS4 ADAMTS4 COL2A1 COL2A1 HYAL4 HYAL4 HYAL3 HYAL3 ACAN ACAN BCAN BCAN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MMP13Collagenase 3; Plays a role in the degradation of extracellular matrix proteins including fibrillar collagen, fibronectin, TNC and ACAN. Cleaves triple helical collagens, including type I, type II and type III collagen, but has the highest activity with soluble type II collagen. Can also degrade collagen type IV, type XIV and type X. May also function by activating or degrading key regulatory proteins, such as TGFB1 and CCN2. Plays a role in wound healing, tissue remodeling, cartilage degradation, bone development, bone mineralization and ossification. Required for normal embryonic bon [...] (471 aa)
ADAMTS5ADAM metallopeptidase with thrombospondin type 1 motif 5. (931 aa)
SOX9SRY-box transcription factor 9. (496 aa)
RUNX2RUNX family transcription factor 2. (343 aa)
ADAMTS4ADAM metallopeptidase with thrombospondin type 1 motif 4. (851 aa)
COL2A1Fibrillar collagen NC1 domain-containing protein. (1487 aa)
HYAL4Hyaluronidase. (484 aa)
HYAL3Hyaluronidase. (492 aa)
ACANAggrecan core protein; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage. (2167 aa)
BCANBrevican. (736 aa)
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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