(5 nodes) Mixed, incl. Glycoside hydrolase, family 79, and CELF-3/4/5/6, RNA recognition motif 1 network (Oryctolagus cuniculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HPSE2	Heparanase 2 (inactive). (592 aa)
	KLHL1	Kelch like family member 1. (746 aa)
	LRRC9	Leucine rich repeat containing 9. (1494 aa)
	SAMD12	Sterile alpha motif domain containing 12. (206 aa)
	CELF4	CUGBP Elav-like family member 4. (565 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CELF4	LRRC9	ENSOCUP00000031928	ENSOCUP00000016925	CUGBP Elav-like family member 4.	Leucine rich repeat containing 9.	0.650
CELF4	SAMD12	ENSOCUP00000031928	ENSOCUP00000028363	CUGBP Elav-like family member 4.	Sterile alpha motif domain containing 12.	0.649
HPSE2	KLHL1	ENSOCUP00000001405	ENSOCUP00000013034	Heparanase 2 (inactive).	Kelch like family member 1.	0.466
KLHL1	HPSE2	ENSOCUP00000013034	ENSOCUP00000001405	Kelch like family member 1.	Heparanase 2 (inactive).	0.466
KLHL1	LRRC9	ENSOCUP00000013034	ENSOCUP00000016925	Kelch like family member 1.	Leucine rich repeat containing 9.	0.505
KLHL1	SAMD12	ENSOCUP00000013034	ENSOCUP00000028363	Kelch like family member 1.	Sterile alpha motif domain containing 12.	0.485
LRRC9	CELF4	ENSOCUP00000016925	ENSOCUP00000031928	Leucine rich repeat containing 9.	CUGBP Elav-like family member 4.	0.650
LRRC9	KLHL1	ENSOCUP00000016925	ENSOCUP00000013034	Leucine rich repeat containing 9.	Kelch like family member 1.	0.505
LRRC9	SAMD12	ENSOCUP00000016925	ENSOCUP00000028363	Leucine rich repeat containing 9.	Sterile alpha motif domain containing 12.	0.854
SAMD12	CELF4	ENSOCUP00000028363	ENSOCUP00000031928	Sterile alpha motif domain containing 12.	CUGBP Elav-like family member 4.	0.649
SAMD12	KLHL1	ENSOCUP00000028363	ENSOCUP00000013034	Sterile alpha motif domain containing 12.	Kelch like family member 1.	0.485
SAMD12	LRRC9	ENSOCUP00000028363	ENSOCUP00000016925	Sterile alpha motif domain containing 12.	Leucine rich repeat containing 9.	0.854