254 items (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSOCUP00000034014	Uncharacterized protein. (134 aa)
	RSRC1	Arginine and serine rich coiled-coil 1. (333 aa)
	SCAF11	SR-related CTD associated factor 11. (1410 aa)
	ENSOCUP00000035251	Uncharacterized protein. (765 aa)
	RNPC3	RNA binding region (RNP1, RRM) containing 3. (591 aa)
	HNRNPA2B1-2	Heterogeneous nuclear ribonucleoprotein A2/B1. (340 aa)
	PRMT7	Protein arginine methyltransferase 7; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (765 aa)
	ENSOCUP00000037445	WD_REPEATS_REGION domain-containing protein. (504 aa)
	SRRM2	Serine/arginine repetitive matrix 2. (2775 aa)
	TXNL4A	Thioredoxin like 4A. (97 aa)
	LOC108177920	Uncharacterized protein. (74 aa)
	UBL5	Ubiquitin like 5. (141 aa)
	CASC3	CASC3 exon junction complex subunit. (742 aa)
	ENSOCUP00000040011	Uncharacterized protein. (155 aa)
	ENSOCUP00000040074	RRM domain-containing protein. (158 aa)
	ENSOCUP00000040270	Uncharacterized protein. (120 aa)
	ENSOCUP00000040421	Uncharacterized protein. (323 aa)
	LSM2	Sm domain-containing protein. (215 aa)
	ENSOCUP00000041200	Uncharacterized protein. (143 aa)
	ENSOCUP00000042353	Uncharacterized protein. (59 aa)
	SART3	Spliceosome associated factor 3, U4/U6 recycling protein. (981 aa)
	PHF5A	PHD finger protein 5A. (173 aa)
	RBM17	RRM_1 domain-containing protein. (124 aa)
	SNRPE	Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
	PRPF40A	Uncharacterized protein. (608 aa)
	G1TEQ0_RABIT	Uncharacterized protein. (356 aa)
	G1TFE3_RABIT	Uncharacterized protein. (430 aa)
	LENG8	Leukocyte receptor cluster member 8. (745 aa)
	G1TGF3_RABIT	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	CLNS1A	Methylosome subunit pICln; Involved in both the assembly of spliceosomal snRNPs and the methylation of Sm proteins (By similarity). Chaperone that regulates the assembly of spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cyto [...] (236 aa)
	PPIL1	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
	SNRPD2	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
	SCNM1	Sodium channel modifier 1 (Predicted). (230 aa)
	SNRNP35	Small nuclear ribonucleoprotein U11/U12 subunit 35. (247 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	SART1	Uncharacterized protein. (160 aa)
	RNF113A	Ring finger protein 113A. (344 aa)
	G1TKP4_RABIT	Uncharacterized protein. (78 aa)
	SF3B6	Splicing factor 3b subunit 6. (125 aa)
	SNRPA	Small nuclear ribonucleoprotein polypeptide A. (265 aa)
	G1TPR7_RABIT	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	G1TQQ8_RABIT	Uncharacterized protein. (246 aa)
	G1TQR4_RABIT	SMAP domain-containing protein. (104 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
	SNIP1	Smad nuclear interacting protein 1. (397 aa)
	NOVA2	NOVA alternative splicing regulator 2. (571 aa)
	G1TT42_RABIT	Tudor domain-containing protein. (271 aa)
	G1TTH1_RABIT	Uncharacterized protein. (371 aa)
	SNRPC-2	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (155 aa)
	G1TTW4_RABIT	Uncharacterized protein. (439 aa)
	LOC100358947	Uncharacterized protein. (320 aa)
	LOC100359118	Uncharacterized protein. (320 aa)
	SF3B1	SF3b1 domain-containing protein. (1120 aa)
	ENSOCUP00000021369	annotation not available (102 aa)
	G1TWF5_RABIT	RRM domain-containing protein. (89 aa)
	HNRNPA2B1	Heterogeneous nuclear ribonucleoprotein A2/B1. (352 aa)
	RBM8A	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
	C9orf78	Chromosome 9 open reading frame 78. (169 aa)
	GEMIN4	Gem nuclear organelle associated protein 4. (1054 aa)
	G1TXZ2_RABIT	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
	G1TYM6_RABIT	Uncharacterized protein. (340 aa)
	TRA2A	Transformer 2 alpha homolog. (282 aa)
	RBM10	RNA binding motif protein 10. (996 aa)
	SNRPC	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (178 aa)
	FAM193B	Family with sequence similarity 193 member B. (815 aa)
	LOC100345587	Uncharacterized protein. (300 aa)
	G1U153_RABIT	Uncharacterized protein. (635 aa)
	LOC100348318	Tudor domain-containing protein. (293 aa)
	G1U1H2_RABIT	J domain-containing protein. (255 aa)
	CELF3	Uncharacterized protein. (457 aa)
	LOC100339901	Uncharacterized protein. (285 aa)
	SF3B3	Splicing factor 3b subunit 3. (1189 aa)
	IK	IK cytokine. (557 aa)
	ZMAT2	Zinc finger matrin-type 2. (199 aa)
	WBP4	WW domain binding protein 4. (370 aa)
	ZRSR2	Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (485 aa)
	SF3B4	Splicing factor 3b subunit 4. (424 aa)
	BUD13	BUD13 homolog. (700 aa)
	SNRPD3	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
	CELF2	CUGBP Elav-like family member 2. (532 aa)
	DDX17	DEAD-box helicase 17; Belongs to the DEAD box helicase family. (716 aa)
	PRPF4	Pre-mRNA processing factor 4. (522 aa)
	SF3A3	Splicing factor 3a subunit 3. (501 aa)
	DNAJC17	DnaJ heat shock protein family (Hsp40) member C17. (303 aa)
	SETX	Senataxin. (2650 aa)
	WDR83	WD repeat domain 83. (315 aa)
	TFIP11	Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (838 aa)
	SRSF3	Serine and arginine rich splicing factor 3. (164 aa)
	NCBP2	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
	SRPK2	SRSF protein kinase 2. (739 aa)
	PRPF39	Pre-mRNA processing factor 39. (669 aa)
	PPIE	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
	SF3B5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	LOC100344160	RRM domain-containing protein. (306 aa)
	TXNL4B	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
	DHX38	DEAH-box helicase 38. (1223 aa)
	SRSF5	Serine and arginine rich splicing factor 5. (276 aa)
	PSIP1	PC4 and SFRS1 interacting protein 1. (531 aa)
	RBM19	RNA binding motif protein 19. (948 aa)
	SNW1	SNW domain containing 1. (536 aa)
	SRSF6	Serine/arginine-rich-splicing factor 6. (215 aa)
	C19orf54	Chromosome 19 open reading frame 54. (367 aa)
	SNRNP200	Small nuclear ribonucleoprotein U5 subunit 200. (2135 aa)
	SF3B2	Splicing factor 3b subunit 2. (869 aa)
	NOL3	Nucleolar protein 3. (212 aa)
	G1SZ25_RABIT	SMAP domain-containing protein. (97 aa)
	GPKOW	G-patch domain and KOW motifs. (487 aa)
	KHDC4	KH domain containing 4, pre-mRNA splicing factor. (612 aa)
	BUD31	BUD31 homolog. (144 aa)
	MFAP1	Microfibrillar-associated protein 1 (Predicted). (439 aa)
	G1T068_RABIT	Uncharacterized protein. (434 aa)
	SNRPF	Small nuclear ribonucleoprotein polypeptide F. (86 aa)
	LOC100345430	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
	SNRPG	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
	PLRG1	Pleiotropic regulator 1. (515 aa)
	RBM22	RNA binding motif protein 22. (420 aa)
	RBM6	RNA binding motif protein 6. (1123 aa)
	SF3B1-2	Uncharacterized protein. (154 aa)
	PQBP1	Polyglutamine binding protein 1. (270 aa)
	SNRPC-5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (170 aa)
	FMC1-LUC7L2	FMC1-LUC7L2 readthrough. (475 aa)
	RNPS1	RRM domain-containing protein. (305 aa)
	PRPF18	SFM domain-containing protein. (415 aa)
	ENSOCUP00000048230	Uncharacterized protein. (215 aa)
	SRSF4	Serine and arginine rich splicing factor 4. (507 aa)
	PRR3	Proline rich 3. (186 aa)
	GEMIN5	Gem nuclear organelle associated protein 5. (1518 aa)
	ENSOCUP00000047469	Uncharacterized protein. (57 aa)
	ENSOCUP00000047449	Uncharacterized protein. (357 aa)
	LUC7L	LUC7 like. (361 aa)
	ENSOCUP00000047334	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
	ENSOCUP00000047305	Uncharacterized protein. (144 aa)
	CWF19L2	CWF19 like cell cycle control factor 2. (1370 aa)
	ENSOCUP00000046496	Uncharacterized protein. (126 aa)
	USP49	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (687 aa)
	ENSOCUP00000046384	Sm domain-containing protein. (123 aa)
	ENSOCUP00000046204	RRM domain-containing protein. (68 aa)
	C11orf58	Chromosome 11 open reading frame 58. (183 aa)
	ENSOCUP00000045841	Uncharacterized protein. (668 aa)
	ENSOCUP00000045555	RRM domain-containing protein. (68 aa)
	ENSOCUP00000044535	Sm domain-containing protein. (48 aa)
	ENSOCUP00000044479	Uncharacterized protein. (139 aa)
	ZCRB1	Uncharacterized protein. (288 aa)
	LOC100340830	Uncharacterized protein. (217 aa)
	PRPF40B	Pre-mRNA processing factor 40 homolog B. (1051 aa)
	SNRPA1	LRRcap domain-containing protein. (340 aa)
	EFTUD2	Elongation factor Tu GTP binding domain containing 2. (1021 aa)
	DDX5	DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
	SNRPN	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	AQR	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1492 aa)
	METTL14	Methyltransferase like 14; Belongs to the MT-A70-like family. (434 aa)
	HNRNPA3	Uncharacterized protein. (378 aa)
	MTHFSD	Methenyltetrahydrofolate synthetase domain containing. (462 aa)
	CWC22	CWC22 spliceosome associated protein homolog. (778 aa)
	SFSWAP	Splicing factor SWAP. (968 aa)
	DHX16	DEAH-box helicase 16. (1044 aa)
	PRPF31	Pre-mRNA processing factor 31. (462 aa)
	PRMT5	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (637 aa)
	GCFC2	GC-rich sequence DNA-binding factor 2. (646 aa)
	CWC15	CWC15 spliceosome associated protein homolog. (229 aa)
	SNRPB2	Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
	G1SFA3_RABIT	Uncharacterized protein. (300 aa)
	CELF1	CUGBP Elav-like family member 1. (512 aa)
	ESRP2	Epithelial splicing regulatory protein 2. (719 aa)
	CDC40	WD_REPEATS_REGION domain-containing protein. (579 aa)
	KDM1A	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (848 aa)
	PRPF38A	Pre-mRNA processing factor 38A. (312 aa)
	SRSF12	Serine and arginine rich splicing factor 12. (166 aa)
	XAB2	XPA binding protein 2. (782 aa)
	GEMIN2	Uncharacterized protein. (282 aa)
	HNRNPC	Heterogeneous nuclear ribonucleoprotein C; Binds pre-mRNA and nucleates the assembly of 40S hnRNP particles. Interacts with poly-U tracts in the 3'-UTR or 5'-UTR of mRNA and modulates the stability and the level of translation of bound mRNA molecules. Single HNRNPC tetramers bind 230-240 nucleotides. Trimers of HNRNPC tetramers bind 700 nucleotides. May play a role in the early steps of spliceosome assembly and pre-mRNA splicing. N6-methyladenosine (m6A) has been shown to alter the local structure in mRNAs and long non-coding RNAs (lncRNAs) via a mechanism named 'm(6)A-switch', facilit [...] (306 aa)
	METTL3	Methyltransferase like 3; Belongs to the MT-A70-like family. (580 aa)
	LRRC51	Uncharacterized protein. (192 aa)
	PRPF8	Pre-mRNA processing factor 8. (2335 aa)
	G1U223_RABIT	Uncharacterized protein. (219 aa)
	BTBD19	BTB domain containing 19. (290 aa)
	SNU13	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	G1U695_RABIT	RRM domain-containing protein. (216 aa)
	SNRPC-3	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
	PRPF4B	Pre-mRNA processing factor 4B. (1056 aa)
	GEMIN8	Gem nuclear organelle associated protein 8. (246 aa)
	DDX39B	DExD-box helicase 39B. (427 aa)
	G1U7T7_RABIT	Small nuclear ribonucleoprotein-associated protein. (218 aa)
	SRSF9	Serine and arginine rich splicing factor 9. (221 aa)
	SF1	CCHC-type domain-containing protein. (630 aa)
	G1U968_RABIT	Uncharacterized protein. (239 aa)
	G1U9J5_RABIT	Uncharacterized protein. (362 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
	LOC100348667	Uncharacterized protein. (356 aa)
	LOC100338456	Uncharacterized protein. (356 aa)
	USP4	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (906 aa)
	DDX20	DEAD-box helicase 20. (826 aa)
	SRSF10	Serine and arginine rich splicing factor 10. (262 aa)
	RBM5	RNA binding motif protein 5. (815 aa)
	SLU7	SLU7 homolog, splicing factor. (587 aa)
	PRPF3	Pre-mRNA processing factor 3. (683 aa)
	RBMX2	RNA binding motif protein X-linked 2. (329 aa)
	DDX46	DEAD-box helicase 46. (1032 aa)
	DCPS	Uncharacterized protein. (337 aa)
	HTATSF1	HIV-1 Tat specific factor 1. (785 aa)
	G1T4K6_RABIT	RRM domain-containing protein. (218 aa)
	G1T572_RABIT	Ribosomal_L7Ae domain-containing protein. (73 aa)
	HNRNPA1	Uncharacterized protein. (371 aa)
	U2AF1L4	Uncharacterized protein. (257 aa)
	SNRNP25	Small nuclear ribonucleoprotein U11/U12 subunit 25. (132 aa)
	NCBP1	Nuclear cap binding protein subunit 1. (799 aa)
	STRAP	Serine/threonine kinase receptor associated protein. (350 aa)
	CWC25	CWC25 spliceosome associated protein homolog. (425 aa)
	SNRPB	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	ENSOCUP00000012913	Oryctolagus cuniculus heterogeneous nuclear ribonucleoprotein C (HNRNPC), mRNA. (306 aa)
	SNRNP70	Small nuclear ribonucleoprotein U1 subunit 70. (561 aa)
	DBR1	Debranching RNA lariats 1. (575 aa)
	CRNKL1	Crooked neck pre-mRNA splicing factor 1. (687 aa)
	GEMIN6	Gem nuclear organelle associated protein 6. (167 aa)
	PRPF19	Pre-mRNA processing factor 19. (504 aa)
	G1TA84_RABIT	Uncharacterized protein. (351 aa)
	YTHDC1	YTH domain containing 1. (655 aa)
	RBM41	RNA binding motif protein 41. (406 aa)
	LRRC72	Leucine rich repeat containing 72. (298 aa)
	RBM44	RNA binding motif protein 44. (1003 aa)
	BCAS2	BCAS2 pre-mRNA processing factor. (225 aa)
	LOC100341643	Tudor domain-containing protein. (295 aa)
	WBP11	Uncharacterized protein. (664 aa)
	CDC5L	Cell division cycle 5 like. (802 aa)
	LSM6	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
	PTBP2	Polypyrimidine tract binding protein 2. (536 aa)
	NOVA1	NOVA alternative splicing regulator 1. (507 aa)
	ENSOCUP00000027407	Sm domain-containing protein. (65 aa)
	ENSOCUP00000027743	RRM domain-containing protein. (86 aa)
	SMU1	SMU1 DNA replication regulator and spliceosomal factor. (604 aa)
	SF3A1	Splicing factor 3a subunit 1. (917 aa)
	PRPF6	Pre-mRNA processing factor 6. (1038 aa)
	ENSOCUP00000028949	Ribosomal_L7Ae domain-containing protein. (73 aa)
	USP39	Ubiquitin specific peptidase 39. (565 aa)
	SRSF1	Uncharacterized protein. (440 aa)
	SNRPC-4	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (160 aa)
	TRA2B	Transformer 2 beta homolog. (340 aa)
	DHX8	DEAH-box helicase 8. (1222 aa)
	ENSOCUP00000029857	LRRcap domain-containing protein. (245 aa)
	DHX9	DExH-box helicase 9. (1298 aa)
	ENSOCUP00000030051	Uncharacterized protein. (135 aa)
	SRSF7	CCHC-type domain-containing protein. (270 aa)
	ENSOCUP00000030956	Uncharacterized protein. (97 aa)
	ENSOCUP00000031127	Uncharacterized protein. (310 aa)
	ENSOCUP00000031526	Uncharacterized protein. (357 aa)
	CELF4	CUGBP Elav-like family member 4. (565 aa)
	ENSOCUP00000032298	annotation not available (205 aa)
	SNRPD2-2	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
	ENSOCUP00000032874	Uncharacterized protein. (53 aa)
	LUC7L3	LUC7 like 3 pre-mRNA splicing factor. (496 aa)
	DDX41	DEAD-box helicase 41. (673 aa)
	ENSOCUP00000033150	Uncharacterized protein. (70 aa)
	SNRPD2-3	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (69 aa)
	SYF2	SYF2 pre-mRNA splicing factor. (278 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR	BCAS2	ENSOCUP00000003030	ENSOCUP00000014426	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	BCAS2 pre-mRNA processing factor.	0.984
AQR	BUD13	ENSOCUP00000003030	ENSOCUP00000003980	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	BUD13 homolog.	0.596
AQR	BUD31	ENSOCUP00000003030	ENSOCUP00000009115	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	BUD31 homolog.	0.998
AQR	CASC3	ENSOCUP00000003030	ENSOCUP00000039915	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	CASC3 exon junction complex subunit.	0.829
AQR	CDC40	ENSOCUP00000003030	ENSOCUP00000001059	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	WD_REPEATS_REGION domain-containing protein.	0.843
AQR	CDC5L	ENSOCUP00000003030	ENSOCUP00000014818	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Cell division cycle 5 like.	0.996
AQR	CRNKL1	ENSOCUP00000003030	ENSOCUP00000013311	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Crooked neck pre-mRNA splicing factor 1.	0.998
AQR	CWC15	ENSOCUP00000003030	ENSOCUP00000001395	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	CWC15 spliceosome associated protein homolog.	0.933
AQR	CWC22	ENSOCUP00000003030	ENSOCUP00000002047	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	CWC22 spliceosome associated protein homolog.	0.891
AQR	CWC25	ENSOCUP00000003030	ENSOCUP00000011959	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	CWC25 spliceosome associated protein homolog.	0.593
AQR	CWF19L2	ENSOCUP00000003030	ENSOCUP00000046957	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	CWF19 like cell cycle control factor 2.	0.859
AQR	DHX16	ENSOCUP00000003030	ENSOCUP00000001868	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	DEAH-box helicase 16.	0.751
AQR	DHX38	ENSOCUP00000003030	ENSOCUP00000007835	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	DEAH-box helicase 38.	0.614
AQR	DHX8	ENSOCUP00000003030	ENSOCUP00000029738	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	DEAH-box helicase 8.	0.928
AQR	DHX9	ENSOCUP00000003030	ENSOCUP00000029909	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	DExH-box helicase 9.	0.409
AQR	EFTUD2	ENSOCUP00000003030	ENSOCUP00000043628	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Elongation factor Tu GTP binding domain containing 2.	0.993
AQR	ENSOCUP00000029857	ENSOCUP00000003030	ENSOCUP00000029857	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	LRRcap domain-containing protein.	0.800
AQR	ENSOCUP00000030051	ENSOCUP00000003030	ENSOCUP00000030051	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Uncharacterized protein.	0.901
AQR	ENSOCUP00000032298	ENSOCUP00000003030	ENSOCUP00000032298	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	annotation not available	0.564
AQR	ENSOCUP00000032874	ENSOCUP00000003030	ENSOCUP00000032874	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Uncharacterized protein.	0.695

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