41 items (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GPAM	Glycerol-3-phosphate acyltransferase 1, mitochondrial. (844 aa)
	ENSOCUP00000045925	TGFb_propeptide domain-containing protein. (272 aa)
	LOC100338113	Uncharacterized protein. (282 aa)
	ENSOCUP00000044284	TGFb_propeptide domain-containing protein. (260 aa)
	DNAJA3	Uncharacterized protein. (479 aa)
	ENSOCUP00000041840	TGFb_propeptide domain-containing protein. (219 aa)
	ENSOCUP00000037329	TGFb_propeptide domain-containing protein. (263 aa)
	BCL2	BH4_2 domain-containing protein. (389 aa)
	ENSOCUP00000033765	Uncharacterized protein. (107 aa)
	IL20RB	Interleukin 20 receptor subunit beta. (307 aa)
	LOC103345451	TGFb_propeptide domain-containing protein. (203 aa)
	PMAIP1	Phorbol-12-myristate-13-acetate-induced protein 1. (54 aa)
	LGALS2	Galectin. (158 aa)
	ZC3H8	Zinc finger CCCH-type containing 8. (355 aa)
	STAT5A	Signal transducer and activator of transcription. (793 aa)
	G1TVC6_RABIT	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (227 aa)
	RAG1	V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1128 aa)
	SIT1	Signaling threshold regulating transmembrane adaptor 1. (206 aa)
	G1TTA9_RABIT	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	PPP3CB	Serine/threonine-protein phosphatase. (518 aa)
	LOC100344662	Uncharacterized protein. (469 aa)
	G1TM55_RABIT	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (248 aa)
	G1TH84_RABIT	AIG1-type G domain-containing protein. (194 aa)
	CORO1A	Coronin; Belongs to the WD repeat coronin family. (441 aa)
	FOXN1	Forkhead box N1. (648 aa)
	NCKAP1L	NCK associated protein 1 like. (1181 aa)
	SPNS2	Sphingolipid transporter 2. (462 aa)
	IL7R	Interleukin 7 receptor. (458 aa)
	SLC46A2	Solute carrier family 46 member 2. (475 aa)
	P2RX7	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (595 aa)
	RC3H2	Ring finger and CCCH-type domains 2. (1132 aa)
	G1SV95_RABIT	Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
	BCL2L11	Bcl-2-like protein 11; Induces apoptosis and anoikis. Belongs to the Bcl-2 family. (194 aa)
	BAX	BCL2 associated X, apoptosis regulator. (192 aa)
	LOC100348108	AIG1-type G domain-containing protein. (312 aa)
	PPP2R3C	Protein phosphatase 2 regulatory subunit B''gamma. (453 aa)
	G1SPA3_RABIT	Uncharacterized protein. (226 aa)
	STAT5B	Signal transducer and activator of transcription. (786 aa)
	GPR174	G protein-coupled receptor 174. (333 aa)
	RC3H1	Ring finger and CCCH-type domains 1. (1134 aa)
	RPS6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAX	BCL2	ENSOCUP00000005553	ENSOCUP00000036189	BCL2 associated X, apoptosis regulator.	BH4_2 domain-containing protein.	0.998
BAX	BCL2L11	ENSOCUP00000005553	ENSOCUP00000006383	BCL2 associated X, apoptosis regulator.	Bcl-2-like protein 11; Induces apoptosis and anoikis. Belongs to the Bcl-2 family.	0.921
BAX	PMAIP1	ENSOCUP00000005553	ENSOCUP00000029174	BCL2 associated X, apoptosis regulator.	Phorbol-12-myristate-13-acetate-induced protein 1.	0.673
BCL2	BAX	ENSOCUP00000036189	ENSOCUP00000005553	BH4_2 domain-containing protein.	BCL2 associated X, apoptosis regulator.	0.998
BCL2	BCL2L11	ENSOCUP00000036189	ENSOCUP00000006383	BH4_2 domain-containing protein.	Bcl-2-like protein 11; Induces apoptosis and anoikis. Belongs to the Bcl-2 family.	0.992
BCL2	ENSOCUP00000037329	ENSOCUP00000036189	ENSOCUP00000037329	BH4_2 domain-containing protein.	TGFb_propeptide domain-containing protein.	0.578
BCL2	ENSOCUP00000044284	ENSOCUP00000036189	ENSOCUP00000044284	BH4_2 domain-containing protein.	TGFb_propeptide domain-containing protein.	0.578
BCL2	IL7R	ENSOCUP00000036189	ENSOCUP00000009807	BH4_2 domain-containing protein.	Interleukin 7 receptor.	0.469
BCL2	LOC103345451	ENSOCUP00000036189	ENSOCUP00000031740	BH4_2 domain-containing protein.	TGFb_propeptide domain-containing protein.	0.578
BCL2	PMAIP1	ENSOCUP00000036189	ENSOCUP00000029174	BH4_2 domain-containing protein.	Phorbol-12-myristate-13-acetate-induced protein 1.	0.917
BCL2	PPP2R3C	ENSOCUP00000036189	ENSOCUP00000004998	BH4_2 domain-containing protein.	Protein phosphatase 2 regulatory subunit B''gamma.	0.900
BCL2	STAT5A	ENSOCUP00000036189	ENSOCUP00000024325	BH4_2 domain-containing protein.	Signal transducer and activator of transcription.	0.605
BCL2	STAT5B	ENSOCUP00000036189	ENSOCUP00000004399	BH4_2 domain-containing protein.	Signal transducer and activator of transcription.	0.604
BCL2L11	BAX	ENSOCUP00000006383	ENSOCUP00000005553	Bcl-2-like protein 11; Induces apoptosis and anoikis. Belongs to the Bcl-2 family.	BCL2 associated X, apoptosis regulator.	0.921
BCL2L11	BCL2	ENSOCUP00000006383	ENSOCUP00000036189	Bcl-2-like protein 11; Induces apoptosis and anoikis. Belongs to the Bcl-2 family.	BH4_2 domain-containing protein.	0.992
BCL2L11	PMAIP1	ENSOCUP00000006383	ENSOCUP00000029174	Bcl-2-like protein 11; Induces apoptosis and anoikis. Belongs to the Bcl-2 family.	Phorbol-12-myristate-13-acetate-induced protein 1.	0.836
CORO1A	NCKAP1L	ENSOCUP00000015557	ENSOCUP00000011635	Coronin; Belongs to the WD repeat coronin family.	NCK associated protein 1 like.	0.484
DNAJA3	LOC100344662	ENSOCUP00000042324	ENSOCUP00000019092	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSOCUP00000037329	BCL2	ENSOCUP00000037329	ENSOCUP00000036189	TGFb_propeptide domain-containing protein.	BH4_2 domain-containing protein.	0.578
ENSOCUP00000037329	ENSOCUP00000044284	ENSOCUP00000037329	ENSOCUP00000044284	TGFb_propeptide domain-containing protein.	TGFb_propeptide domain-containing protein.	0.412