STRINGSTRING
BRCA1 BRCA1 TP53BP1 TP53BP1 ENSOCUP00000045925 ENSOCUP00000045925 BCL2L1 BCL2L1 ATR ATR CDCA7 CDCA7 SPIDR SPIDR BARD1 BARD1 KDM1A KDM1A TP53 TP53 G1U940_RABIT G1U940_RABIT GTF2H5 GTF2H5 ECT2 ECT2 SIRT1 SIRT1 TNKS1BP1 TNKS1BP1 TREX1 TREX1 ENSOCUP00000045399 ENSOCUP00000045399 ENSOCUP00000044284 ENSOCUP00000044284 GRB2 GRB2 ELK1 ELK1 ENSOCUP00000037329 ENSOCUP00000037329 RHOB RHOB DNM2 DNM2 ENSOCUP00000039002 ENSOCUP00000039002 ENSOCUP00000040237 ENSOCUP00000040237 ENSOCUP00000041840 ENSOCUP00000041840 TANK TANK TSPYL5 TSPYL5 NUCKS1 NUCKS1 CHEK2 CHEK2 G1TLX8_RABIT G1TLX8_RABIT RAD51 RAD51 BRCA2 BRCA2 SFRP2 SFRP2 NET1 NET1 HSF1 HSF1 LOC103345451 LOC103345451 RAD9A RAD9A TLK2 TLK2 ENSOCUP00000029917 ENSOCUP00000029917 ITGB6 ITGB6 PRAP1 PRAP1 INTS7 INTS7 CDKN1A CDKN1A ZMPSTE24 ZMPSTE24 LIG4 LIG4 TMEM109 TMEM109 CCND2 CCND2 MAP3K20 MAP3K20 ATM ATM RAD1 RAD1 BLM BLM CRYAB CRYAB WRN WRN SNAI2 SNAI2 INO80 INO80 BABAM2 BABAM2 FBXO4 FBXO4 G1SV95_RABIT G1SV95_RABIT EGR1 EGR1 RAD9B RAD9B RHNO1 RHNO1 XRCC6 XRCC6 XRCC5 XRCC5 NIPBL NIPBL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1852 aa)
TP53BP1Tumor protein p53 binding protein 1. (1976 aa)
ENSOCUP00000045925TGFb_propeptide domain-containing protein. (272 aa)
BCL2L1Bcl-X. (233 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2643 aa)
CDCA7Cell division cycle associated 7. (451 aa)
SPIDRScaffold protein involved in DNA repair. (920 aa)
BARD1BRCA1 associated RING domain 1. (751 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (848 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (391 aa)
G1U940_RABITCellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (178 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
ECT2Epithelial cell transforming 2. (952 aa)
SIRT1Sirtuin 1. (748 aa)
TNKS1BP1Tankyrase 1 binding protein 1. (1669 aa)
TREX1Three prime repair exonuclease 1. (314 aa)
ENSOCUP00000045399Uncharacterized protein. (182 aa)
ENSOCUP00000044284TGFb_propeptide domain-containing protein. (260 aa)
GRB2Growth factor receptor bound protein 2. (278 aa)
ELK1ETS transcription factor ELK1. (512 aa)
ENSOCUP00000037329TGFb_propeptide domain-containing protein. (263 aa)
RHOBRas homolog family member B. (196 aa)
DNM2Dynamin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (846 aa)
ENSOCUP00000039002Uncharacterized protein. (163 aa)
ENSOCUP00000040237DUF4502 domain-containing protein. (114 aa)
ENSOCUP00000041840TGFb_propeptide domain-containing protein. (219 aa)
TANKTRAF family member associated NFKB activator. (425 aa)
TSPYL5TSPY like 5; Belongs to the nucleosome assembly protein (NAP) family. (416 aa)
NUCKS1Nuclear casein kinase and cyclin dependent kinase substrate 1. (304 aa)
CHEK2Checkpoint kinase 2. (538 aa)
G1TLX8_RABITRING-type domain-containing protein. (248 aa)
RAD51DNA repair protein RAD51 homolog 1; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination (HR). Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Part of a PALB2-scaffolded HR [...] (339 aa)
BRCA2BRCA2 DNA repair associated. (3412 aa)
SFRP2Secreted frizzled related protein 2. (295 aa)
NET1Neuroepithelial cell transforming 1. (596 aa)
HSF1Heat shock transcription factor 1. (680 aa)
LOC103345451TGFb_propeptide domain-containing protein. (203 aa)
RAD9ARAD9 checkpoint clamp component A. (544 aa)
TLK2Tousled like kinase 2. (984 aa)
ENSOCUP00000029917Uncharacterized protein. (169 aa)
ITGB6Integrin beta; Belongs to the integrin beta chain family. (787 aa)
PRAP1Uncharacterized protein. (189 aa)
INTS7Integrator complex subunit 7. (962 aa)
CDKN1AUncharacterized protein. (231 aa)
ZMPSTE24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (475 aa)
LIG4DNA ligase. (911 aa)
TMEM109Transmembrane protein 109; May mediate cellular response to DNA damage by protecting against ultraviolet C-induced cell death (By similarity). Can form voltage-gated calcium and potassium channels in vitro. (243 aa)
CCND2Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (431 aa)
MAP3K20Mitogen-activated protein kinase kinase kinase 20. (875 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
RAD1RAD1 checkpoint DNA exonuclease. (282 aa)
BLMBLM RecQ like helicase. (1414 aa)
CRYABAlpha-crystallin B chain; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions; Belongs to the small heat shock protein (HSP20) family. (175 aa)
WRNWRN RecQ like helicase. (1360 aa)
SNAI2Uncharacterized protein. (268 aa)
INO80INO80 complex ATPase subunit. (1559 aa)
BABAM2BRISC and BRCA1 A complex member 2. (407 aa)
FBXO4F-box protein 4. (387 aa)
G1SV95_RABITTransforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
EGR1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (700 aa)
RAD9BUncharacterized protein. (637 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (240 aa)
XRCC6X-ray repair cross complementing 6. (632 aa)
XRCC5X-ray repair cross complementing 5. (733 aa)
NIPBLNipped-B protein. (2580 aa)
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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