30 items (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHEX	Phosphate regulating endopeptidase homolog X-linked. (749 aa)
	G1SFA3_RABIT	Uncharacterized protein. (300 aa)
	HNRNPD	Heterogeneous nuclear ribonucleoprotein D. (286 aa)
	HSF1	Heat shock transcription factor 1. (680 aa)
	LOC103345451	TGFb_propeptide domain-containing protein. (203 aa)
	FGF23	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family. (252 aa)
	LOC100345587	Uncharacterized protein. (300 aa)
	LOC100359118	Uncharacterized protein. (320 aa)
	LOC100358947	Uncharacterized protein. (320 aa)
	ENSOCUP00000037329	TGFb_propeptide domain-containing protein. (263 aa)
	ENSOCUP00000041840	TGFb_propeptide domain-containing protein. (219 aa)
	ENSOCUP00000044284	TGFb_propeptide domain-containing protein. (260 aa)
	DAB2	DAB adaptor protein 2. (769 aa)
	MAPK13	Mitogen-activated protein kinase. (399 aa)
	ENSOCUP00000045925	TGFb_propeptide domain-containing protein. (272 aa)
	HPCAL1	Hippocalcin like 1. (193 aa)
	NEFL	Neurofilament light; Belongs to the intermediate filament family. (548 aa)
	G1TEQ0_RABIT	Uncharacterized protein. (356 aa)
	EDNRB	Endothelin receptor type B; Non-specific receptor for endothelin 1, 2, and 3. Mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system (By similarity). Belongs to the G-protein coupled receptor 1 family. Endothelin receptor subfamily. EDNRB sub-subfamily. (441 aa)
	PITX3	Homeobox protein. (302 aa)
	HPCA	Hippocalcin. (193 aa)
	HNRNPA1	Uncharacterized protein. (371 aa)
	ANKH	ANKH inorganic pyrophosphate transport regulator. (492 aa)
	ZC3H12A	Zinc finger CCCH-type containing 12A. (580 aa)
	DAXX	Death domain associated protein. (740 aa)
	RNLS	Renalase, FAD dependent amine oxidase. (342 aa)
	SLC26A5	Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (744 aa)
	ABCC6	ATP binding cassette subfamily C member 6. (1503 aa)
	G1SV95_RABIT	Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
	ALPL	Alkaline phosphatase. (558 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCC6	ANKH	ENSOCUP00000008813	ENSOCUP00000010370	ATP binding cassette subfamily C member 6.	ANKH inorganic pyrophosphate transport regulator.	0.499
ALPL	ANKH	ENSOCUP00000003846	ENSOCUP00000010370	Alkaline phosphatase.	ANKH inorganic pyrophosphate transport regulator.	0.432
ALPL	PHEX	ENSOCUP00000003846	ENSOCUP00000005217	Alkaline phosphatase.	Phosphate regulating endopeptidase homolog X-linked.	0.693
ANKH	ABCC6	ENSOCUP00000010370	ENSOCUP00000008813	ANKH inorganic pyrophosphate transport regulator.	ATP binding cassette subfamily C member 6.	0.499
ANKH	ALPL	ENSOCUP00000010370	ENSOCUP00000003846	ANKH inorganic pyrophosphate transport regulator.	Alkaline phosphatase.	0.432
ENSOCUP00000037329	ENSOCUP00000044284	ENSOCUP00000037329	ENSOCUP00000044284	TGFb_propeptide domain-containing protein.	TGFb_propeptide domain-containing protein.	0.412
ENSOCUP00000037329	LOC103345451	ENSOCUP00000037329	ENSOCUP00000031740	TGFb_propeptide domain-containing protein.	TGFb_propeptide domain-containing protein.	0.419
ENSOCUP00000044284	ENSOCUP00000037329	ENSOCUP00000044284	ENSOCUP00000037329	TGFb_propeptide domain-containing protein.	TGFb_propeptide domain-containing protein.	0.412
FGF23	PHEX	ENSOCUP00000024175	ENSOCUP00000005217	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.	Phosphate regulating endopeptidase homolog X-linked.	0.930
G1SFA3_RABIT	HNRNPD	ENSOCUP00000001180	ENSOCUP00000001170	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein D.	0.466
G1TEQ0_RABIT	HNRNPD	ENSOCUP00000015383	ENSOCUP00000001170	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein D.	0.462
HNRNPA1	HNRNPD	ENSOCUP00000011492	ENSOCUP00000001170	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein D.	0.518
HNRNPD	G1SFA3_RABIT	ENSOCUP00000001170	ENSOCUP00000001180	Heterogeneous nuclear ribonucleoprotein D.	Uncharacterized protein.	0.466
HNRNPD	G1TEQ0_RABIT	ENSOCUP00000001170	ENSOCUP00000015383	Heterogeneous nuclear ribonucleoprotein D.	Uncharacterized protein.	0.462
HNRNPD	HNRNPA1	ENSOCUP00000001170	ENSOCUP00000011492	Heterogeneous nuclear ribonucleoprotein D.	Uncharacterized protein.	0.518
HNRNPD	LOC100345587	ENSOCUP00000001170	ENSOCUP00000022872	Heterogeneous nuclear ribonucleoprotein D.	Uncharacterized protein.	0.466
HNRNPD	LOC100358947	ENSOCUP00000001170	ENSOCUP00000020602	Heterogeneous nuclear ribonucleoprotein D.	Uncharacterized protein.	0.460
HNRNPD	LOC100359118	ENSOCUP00000001170	ENSOCUP00000020746	Heterogeneous nuclear ribonucleoprotein D.	Uncharacterized protein.	0.462
HSF1	MAPK13	ENSOCUP00000031991	ENSOCUP00000047230	Heat shock transcription factor 1.	Mitogen-activated protein kinase.	0.504
LOC100345587	HNRNPD	ENSOCUP00000022872	ENSOCUP00000001170	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein D.	0.466