6 items (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RBM20	RNA binding motif protein 20. (1204 aa)
	SF3B1-2	Uncharacterized protein. (154 aa)
	ENSOCUP00000033150	Uncharacterized protein. (70 aa)
	SF3B1	SF3b1 domain-containing protein. (1120 aa)
	SF3B4	Splicing factor 3b subunit 4. (424 aa)
	SF3B5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOCUP00000033150	SF3B4	ENSOCUP00000033150	ENSOCUP00000003976	Uncharacterized protein.	Splicing factor 3b subunit 4.	0.952
ENSOCUP00000033150	SF3B5	ENSOCUP00000033150	ENSOCUP00000007556	Uncharacterized protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.946
SF3B1	SF3B1-2	ENSOCUP00000021051	ENSOCUP00000049862	SF3b1 domain-containing protein.	Uncharacterized protein.	0.921
SF3B1	SF3B4	ENSOCUP00000021051	ENSOCUP00000003976	SF3b1 domain-containing protein.	Splicing factor 3b subunit 4.	0.952
SF3B1	SF3B5	ENSOCUP00000021051	ENSOCUP00000007556	SF3b1 domain-containing protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.946
SF3B1-2	SF3B1	ENSOCUP00000049862	ENSOCUP00000021051	Uncharacterized protein.	SF3b1 domain-containing protein.	0.921
SF3B1-2	SF3B4	ENSOCUP00000049862	ENSOCUP00000003976	Uncharacterized protein.	Splicing factor 3b subunit 4.	0.992
SF3B1-2	SF3B5	ENSOCUP00000049862	ENSOCUP00000007556	Uncharacterized protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.991
SF3B4	ENSOCUP00000033150	ENSOCUP00000003976	ENSOCUP00000033150	Splicing factor 3b subunit 4.	Uncharacterized protein.	0.952
SF3B4	SF3B1	ENSOCUP00000003976	ENSOCUP00000021051	Splicing factor 3b subunit 4.	SF3b1 domain-containing protein.	0.952
SF3B4	SF3B1-2	ENSOCUP00000003976	ENSOCUP00000049862	Splicing factor 3b subunit 4.	Uncharacterized protein.	0.992
SF3B4	SF3B5	ENSOCUP00000003976	ENSOCUP00000007556	Splicing factor 3b subunit 4.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.999
SF3B5	ENSOCUP00000033150	ENSOCUP00000007556	ENSOCUP00000033150	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.946
SF3B5	SF3B1	ENSOCUP00000007556	ENSOCUP00000021051	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	SF3b1 domain-containing protein.	0.946
SF3B5	SF3B1-2	ENSOCUP00000007556	ENSOCUP00000049862	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Uncharacterized protein.	0.991
SF3B5	SF3B4	ENSOCUP00000007556	ENSOCUP00000003976	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	Splicing factor 3b subunit 4.	0.999