21 items (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	SNRPG	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
	SF3B4	Splicing factor 3b subunit 4. (424 aa)
	SNRNP48	Small nuclear ribonucleoprotein U11/U12 subunit 48. (323 aa)
	SF3B5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	SF3B2	Splicing factor 3b subunit 2. (869 aa)
	SNRPF	Small nuclear ribonucleoprotein polypeptide F. (86 aa)
	SNRNP25	Small nuclear ribonucleoprotein U11/U12 subunit 25. (132 aa)
	SNRPB	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	RBM41	RNA binding motif protein 41. (406 aa)
	G1TGF3_RABIT	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	SNRNP35	Small nuclear ribonucleoprotein U11/U12 subunit 35. (247 aa)
	SF3B6	Splicing factor 3b subunit 6. (125 aa)
	G1TPR7_RABIT	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	G1TQQ8_RABIT	Uncharacterized protein. (246 aa)
	G1U7T7_RABIT	Small nuclear ribonucleoprotein-associated protein. (218 aa)
	ZMAT5	Zinc finger matrin-type 5. (210 aa)
	RNPC3	RNA binding region (RNP1, RRM) containing 3. (591 aa)
	PHF5A	PHD finger protein 5A. (173 aa)
	LOC100340830	Uncharacterized protein. (217 aa)
	ZCRB1	Uncharacterized protein. (288 aa)
	ENSOCUP00000044479	Uncharacterized protein. (139 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOCUP00000044479	RNPC3	ENSOCUP00000044479	ENSOCUP00000035273	Uncharacterized protein.	RNA binding region (RNP1, RRM) containing 3.	0.705
ENSOCUP00000044479	SF3B2	ENSOCUP00000044479	ENSOCUP00000008547	Uncharacterized protein.	Splicing factor 3b subunit 2.	0.686
ENSOCUP00000044479	SF3B4	ENSOCUP00000044479	ENSOCUP00000003976	Uncharacterized protein.	Splicing factor 3b subunit 4.	0.693
ENSOCUP00000044479	SF3B5	ENSOCUP00000044479	ENSOCUP00000007556	Uncharacterized protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.636
ENSOCUP00000044479	SF3B6	ENSOCUP00000044479	ENSOCUP00000017726	Uncharacterized protein.	Splicing factor 3b subunit 6.	0.686
ENSOCUP00000044479	SNRNP25	ENSOCUP00000044479	ENSOCUP00000011720	Uncharacterized protein.	Small nuclear ribonucleoprotein U11/U12 subunit 25.	0.529
ENSOCUP00000044479	SNRNP35	ENSOCUP00000044479	ENSOCUP00000016734	Uncharacterized protein.	Small nuclear ribonucleoprotein U11/U12 subunit 35.	0.537
ENSOCUP00000044479	SNRNP48	ENSOCUP00000044479	ENSOCUP00000004475	Uncharacterized protein.	Small nuclear ribonucleoprotein U11/U12 subunit 48.	0.519
ENSOCUP00000044479	SNRPF	ENSOCUP00000044479	ENSOCUP00000009401	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide F.	0.715
ENSOCUP00000044479	SNRPG	ENSOCUP00000044479	ENSOCUP00000009651	Uncharacterized protein.	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.	0.693
ENSOCUP00000044479	ZMAT5	ENSOCUP00000044479	ENSOCUP00000030895	Uncharacterized protein.	Zinc finger matrin-type 5.	0.663
G1TGF3_RABIT	PHF5A	ENSOCUP00000016003	ENSOCUP00000042841	Small nuclear ribonucleoprotein-associated protein.	PHD finger protein 5A.	0.731
G1TGF3_RABIT	RBM41	ENSOCUP00000016003	ENSOCUP00000013685	Small nuclear ribonucleoprotein-associated protein.	RNA binding motif protein 41.	0.601
G1TGF3_RABIT	RNPC3	ENSOCUP00000016003	ENSOCUP00000035273	Small nuclear ribonucleoprotein-associated protein.	RNA binding region (RNP1, RRM) containing 3.	0.601
G1TGF3_RABIT	SF3B2	ENSOCUP00000016003	ENSOCUP00000008547	Small nuclear ribonucleoprotein-associated protein.	Splicing factor 3b subunit 2.	0.764
G1TGF3_RABIT	SF3B4	ENSOCUP00000016003	ENSOCUP00000003976	Small nuclear ribonucleoprotein-associated protein.	Splicing factor 3b subunit 4.	0.772
G1TGF3_RABIT	SF3B5	ENSOCUP00000016003	ENSOCUP00000007556	Small nuclear ribonucleoprotein-associated protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.749
G1TGF3_RABIT	SF3B6	ENSOCUP00000016003	ENSOCUP00000017726	Small nuclear ribonucleoprotein-associated protein.	Splicing factor 3b subunit 6.	0.634
G1TGF3_RABIT	SNRNP35	ENSOCUP00000016003	ENSOCUP00000016734	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein U11/U12 subunit 35.	0.664
G1TGF3_RABIT	SNRNP48	ENSOCUP00000016003	ENSOCUP00000004475	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein U11/U12 subunit 48.	0.612