19 items (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL39	Ribosomal protein L39 (Predicted). (51 aa)
	RANBP1	RAN binding protein 1. (266 aa)
	PDIA3	Protein disulfide-isomerase. (502 aa)
	TBCD	Tubulin folding cofactor D. (1193 aa)
	NKIRAS1	NFKB inhibitor interacting Ras like 1. (192 aa)
	ATP2B4	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1205 aa)
	TTC7B	Uncharacterized protein. (802 aa)
	TEX2	Testis expressed 2. (1134 aa)
	NDC1	NDC1 transmembrane nucleoporin. (822 aa)
	LOC100344594	Uncharacterized protein. (64 aa)
	AAK1	AP2 associated kinase 1. (1305 aa)
	FBL	Fibrillarin. (320 aa)
	DKC1	Dyskerin pseudouridine synthase 1. (512 aa)
	RPL39-2	Uncharacterized protein. (51 aa)
	NOP56	NOP56 ribonucleoprotein. (594 aa)
	UCHL5	Ubiquitin carboxyl-terminal hydrolase. (609 aa)
	NHP2	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (153 aa)
	ASTN2	Astrotactin 2. (1224 aa)
	SNU13	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP2B4	NKIRAS1	ENSOCUP00000005655	ENSOCUP00000002146	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	NFKB inhibitor interacting Ras like 1.	0.410
ATP2B4	TEX2	ENSOCUP00000005655	ENSOCUP00000036784	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	Testis expressed 2.	0.482
DKC1	FBL	ENSOCUP00000019728	ENSOCUP00000007791	Dyskerin pseudouridine synthase 1.	Fibrillarin.	0.999
DKC1	LOC100344594	ENSOCUP00000019728	ENSOCUP00000035618	Dyskerin pseudouridine synthase 1.	Uncharacterized protein.	0.997
DKC1	NHP2	ENSOCUP00000019728	ENSOCUP00000013797	Dyskerin pseudouridine synthase 1.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.998
DKC1	NOP56	ENSOCUP00000019728	ENSOCUP00000012855	Dyskerin pseudouridine synthase 1.	NOP56 ribonucleoprotein.	0.999
DKC1	SNU13	ENSOCUP00000019728	ENSOCUP00000024709	Dyskerin pseudouridine synthase 1.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.971
FBL	DKC1	ENSOCUP00000007791	ENSOCUP00000019728	Fibrillarin.	Dyskerin pseudouridine synthase 1.	0.999
FBL	LOC100344594	ENSOCUP00000007791	ENSOCUP00000035618	Fibrillarin.	Uncharacterized protein.	0.893
FBL	NHP2	ENSOCUP00000007791	ENSOCUP00000013797	Fibrillarin.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.981
FBL	NOP56	ENSOCUP00000007791	ENSOCUP00000012855	Fibrillarin.	NOP56 ribonucleoprotein.	0.999
FBL	RANBP1	ENSOCUP00000007791	ENSOCUP00000016208	Fibrillarin.	RAN binding protein 1.	0.538
FBL	SNU13	ENSOCUP00000007791	ENSOCUP00000024709	Fibrillarin.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.997
LOC100344594	DKC1	ENSOCUP00000035618	ENSOCUP00000019728	Uncharacterized protein.	Dyskerin pseudouridine synthase 1.	0.997
LOC100344594	FBL	ENSOCUP00000035618	ENSOCUP00000007791	Uncharacterized protein.	Fibrillarin.	0.893
LOC100344594	NHP2	ENSOCUP00000035618	ENSOCUP00000013797	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.999
LOC100344594	NOP56	ENSOCUP00000035618	ENSOCUP00000012855	Uncharacterized protein.	NOP56 ribonucleoprotein.	0.910
LOC100344594	RPL39	ENSOCUP00000035618	ENSOCUP00000018595	Uncharacterized protein.	Ribosomal protein L39 (Predicted).	0.558
LOC100344594	RPL39-2	ENSOCUP00000035618	ENSOCUP00000008803	Uncharacterized protein.	Uncharacterized protein.	0.567
LOC100344594	SNU13	ENSOCUP00000035618	ENSOCUP00000024709	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.901