STRINGSTRING
SEC31A SEC31A KBTBD8 KBTBD8 SKP1 SKP1 KLHL41 KLHL41 USP9X USP9X DET1 DET1 UBE2M UBE2M KLHL1 KLHL1 KLHL25 KLHL25 SEC13 SEC13 KLHL12 KLHL12 UBA1 UBA1 UBA3 UBA3 PEF1 PEF1 USP19 USP19 CAND1 CAND1 USP25 USP25 PCNA PCNA TCOF1 TCOF1 NEDD8 NEDD8 CUL1 CUL1 CAND2 CAND2 GAPDH GAPDH SVIP SVIP VCL VCL CUL3 CUL3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEC31ASEC31 homolog A, COPII coat complex component. (1263 aa)
KBTBD8Uncharacterized protein. (153 aa)
SKP1Uncharacterized protein; Belongs to the SKP1 family. (163 aa)
KLHL41Kelch like family member 41. (606 aa)
USP9XUbiquitin specific peptidase 9 X-linked; Belongs to the peptidase C19 family. (2575 aa)
DET1Uncharacterized protein. (553 aa)
UBE2MUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (457 aa)
KLHL1Kelch like family member 1. (746 aa)
KLHL25Kelch like family member 25. (734 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (468 aa)
KLHL12Kelch like family member 12. (851 aa)
UBA1Ubiquitin-like modifier-activating enzyme 1; Catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation through the ubiquitin-proteasome system. Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin-E1 thioester and free AMP. Essential for the formation of radiation-induced foci, timely DNA repair and for response to replication stress. Promotes the recruitment of TP53BP1 and BRCA1 at DNA damage sites (By similarity). (1058 aa)
UBA3Ubiquitin like modifier activating enzyme 3. (463 aa)
PEF1Penta-EF-hand domain containing 1. (277 aa)
USP19Ubiquitin specific peptidase 19. (1379 aa)
CAND1Cullin associated and neddylation dissociated 1. (1207 aa)
USP25Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. (1152 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
TCOF1Treacle ribosome biogenesis factor 1. (1492 aa)
NEDD8NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex UBE1C-APPBP1 and linkage to the E2 enzyme UBE2M. Attachment of NEDD8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins (By similarity). (81 aa)
CUL1Cullin 1; Belongs to the cullin family. (775 aa)
CAND2Cullin associated and neddylation dissociated 2 (putative). (1267 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...] (333 aa)
SVIPUncharacterized protein. (231 aa)
VCLVinculin. (1241 aa)
CUL3Cullin 3; Belongs to the cullin family. (771 aa)
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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