STRINGSTRING
CD19 CD19 IKZF3 IKZF3 PARPBP PARPBP METTL14 METTL14 SETX SETX XRCC5 XRCC5 XRCC6 XRCC6 BCL2L11 BCL2L11 UBR5 UBR5 EBF1 EBF1 RFWD3 RFWD3 CUL4A CUL4A FOXP3 FOXP3 TIA1 TIA1 MYB MYB PAX5 PAX5 FOXO1 FOXO1 ATM ATM CD93 CD93 PTBP2 PTBP2 CHEK2 CHEK2 RAD50 RAD50 ZFP36L1 ZFP36L1 IL6 IL6 IGHM-2 IGHM-2 CD3E CD3E RAG1 RAG1 PAXIP1 PAXIP1 RAG2 RAG2 IGHM-3 IGHM-3 BCR BCR ZFP36L2 ZFP36L2 DHX9 DHX9 TRIP12 TRIP12 CNOT3 CNOT3 IL7 IL7 TIAL1 TIAL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CD19CD19 molecule. (573 aa)
IKZF3IKAROS family zinc finger 3. (509 aa)
PARPBPPARP1 binding protein. (577 aa)
METTL14Methyltransferase like 14; Belongs to the MT-A70-like family. (434 aa)
SETXSenataxin. (2650 aa)
XRCC5X-ray repair cross complementing 5. (733 aa)
XRCC6X-ray repair cross complementing 6. (632 aa)
BCL2L11Bcl-2-like protein 11; Induces apoptosis and anoikis. Belongs to the Bcl-2 family. (194 aa)
UBR5Ubiquitin protein ligase E3 component n-recognin 5. (2769 aa)
EBF1EBF transcription factor 1. (591 aa)
RFWD3Ring finger and WD repeat domain 3. (805 aa)
CUL4ACullin 4A; Belongs to the cullin family. (759 aa)
FOXP3Forkhead box P3. (455 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (386 aa)
MYBMYB proto-oncogene, transcription factor. (758 aa)
PAX5Paired box 5. (371 aa)
FOXO1Fork-head domain-containing protein. (613 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
CD93CD93 molecule. (653 aa)
PTBP2Polypyrimidine tract binding protein 2. (536 aa)
CHEK2Checkpoint kinase 2. (538 aa)
RAD50Zinc-hook domain-containing protein. (1269 aa)
ZFP36L1Uncharacterized protein. (338 aa)
IL6Interleukin-6; Cytokine with a wide variety of biological functions. It is a potent inducer of the acute phase response. Plays an essential role in the final differentiation of B-cells into Ig-secreting cells Involved in lymphocyte and monocyte differentiation. Acts on B-cells, T-cells, hepatocytes, hematopoietic progenitor cells and cells of the CNS. Required for the generation of T(H)17 cells. Also acts as a myokine. It is discharged into the bloodstream after muscle contraction and acts to increase the breakdown of fats and to improve insulin resistance. It induces myeloma and plasm [...] (241 aa)
IGHM-2Ig-like domain-containing protein. (167 aa)
CD3ET-cell surface glycoprotein CD3 epsilon chain; Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR- mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation o [...] (201 aa)
RAG1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1128 aa)
PAXIP1PAX interacting protein 1. (1035 aa)
RAG2V(D)J recombination-activating protein 2; Core component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T- cell receptor genes in developing B and T-lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. DNA cleavage by the RAG complex occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the pho [...] (527 aa)
IGHM-3Ig-like domain-containing protein. (167 aa)
BCRBCR activator of RhoGEF and GTPase. (1192 aa)
ZFP36L2ZFP36 ring finger protein like 2. (467 aa)
DHX9DExH-box helicase 9. (1298 aa)
TRIP12Thyroid hormone receptor interactor 12. (2040 aa)
CNOT3Uncharacterized protein. (904 aa)
IL7Interleukin-7; Hematopoietic growth factor capable of stimulating the proliferation of lymphoid progenitors. It is important for proliferation during certain stages of B-cell maturation. Belongs to the IL-7/IL-9 family. (175 aa)
TIAL1TIA1 cytotoxic granule associated RNA binding protein like 1. (382 aa)
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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