22 items (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACTB	Uncharacterized protein. (357 aa)
	CD44	CD44 molecule (Indian blood group). (761 aa)
	ERCC3	ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
	RAD21	RAD21 cohesin complex component. (630 aa)
	BUD13	BUD13 homolog. (700 aa)
	HK1	Hexokinase 1. (921 aa)
	EBF1	EBF transcription factor 1. (591 aa)
	PAX5	Paired box 5. (371 aa)
	IKZF1	IKAROS family zinc finger 1. (515 aa)
	PGK1	Phosphoglycerate kinase. (417 aa)
	NEDD9	Neural precursor cell expressed, developmentally down-regulated 9. (828 aa)
	WAPL	WAPL cohesin release factor. (1196 aa)
	IGHM-2	Ig-like domain-containing protein. (167 aa)
	MEOX2	Mesenchyme homeobox 2. (303 aa)
	YY1	Uncharacterized protein. (190 aa)
	RAG2	V(D)J recombination-activating protein 2; Core component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T- cell receptor genes in developing B and T-lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. DNA cleavage by the RAG complex occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the pho [...] (527 aa)
	TBP	TATA-box binding protein. (323 aa)
	IGHM-3	Ig-like domain-containing protein. (167 aa)
	BCR	BCR activator of RhoGEF and GTPase. (1192 aa)
	CTCF	CCCTC-binding factor. (738 aa)
	CD19	CD19 molecule. (573 aa)
	IL7	Interleukin-7; Hematopoietic growth factor capable of stimulating the proliferation of lymphoid progenitors. It is important for proliferation during certain stages of B-cell maturation. Belongs to the IL-7/IL-9 family. (175 aa)

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	CD19	ENSOCUP00000045964	ENSOCUP00000036537	Uncharacterized protein.	CD19 molecule.	0.447
ACTB	CD44	ENSOCUP00000045964	ENSOCUP00000048202	Uncharacterized protein.	CD44 molecule (Indian blood group).	0.524
ACTB	PGK1	ENSOCUP00000045964	ENSOCUP00000012659	Uncharacterized protein.	Phosphoglycerate kinase.	0.717
ACTB	TBP	ENSOCUP00000045964	ENSOCUP00000021552	Uncharacterized protein.	TATA-box binding protein.	0.840
ACTB	YY1	ENSOCUP00000045964	ENSOCUP00000019701	Uncharacterized protein.	Uncharacterized protein.	0.474
BCR	ERCC3	ENSOCUP00000027066	ENSOCUP00000001942	BCR activator of RhoGEF and GTPase.	ERCC excision repair 3, TFIIH core complex helicase subunit.	0.437
CD19	ACTB	ENSOCUP00000036537	ENSOCUP00000045964	CD19 molecule.	Uncharacterized protein.	0.447
CD19	CD44	ENSOCUP00000036537	ENSOCUP00000048202	CD19 molecule.	CD44 molecule (Indian blood group).	0.922
CD19	EBF1	ENSOCUP00000036537	ENSOCUP00000007763	CD19 molecule.	EBF transcription factor 1.	0.597
CD19	IGHM-2	ENSOCUP00000036537	ENSOCUP00000018495	CD19 molecule.	Ig-like domain-containing protein.	0.775
CD19	IGHM-3	ENSOCUP00000036537	ENSOCUP00000025645	CD19 molecule.	Ig-like domain-containing protein.	0.775
CD19	IKZF1	ENSOCUP00000036537	ENSOCUP00000012401	CD19 molecule.	IKAROS family zinc finger 1.	0.442
CD19	IL7	ENSOCUP00000036537	ENSOCUP00000038193	CD19 molecule.	Interleukin-7; Hematopoietic growth factor capable of stimulating the proliferation of lymphoid progenitors. It is important for proliferation during certain stages of B-cell maturation. Belongs to the IL-7/IL-9 family.	0.789
CD19	PAX5	ENSOCUP00000036537	ENSOCUP00000010574	CD19 molecule.	Paired box 5.	0.833
CD19	RAG2	ENSOCUP00000036537	ENSOCUP00000020912	CD19 molecule.	V(D)J recombination-activating protein 2; Core component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T- cell receptor genes in developing B and T-lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. DNA cleavage by the RAG complex occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the pho [...]	0.734
CD44	ACTB	ENSOCUP00000048202	ENSOCUP00000045964	CD44 molecule (Indian blood group).	Uncharacterized protein.	0.524
CD44	CD19	ENSOCUP00000048202	ENSOCUP00000036537	CD44 molecule (Indian blood group).	CD19 molecule.	0.922
CD44	IL7	ENSOCUP00000048202	ENSOCUP00000038193	CD44 molecule (Indian blood group).	Interleukin-7; Hematopoietic growth factor capable of stimulating the proliferation of lymphoid progenitors. It is important for proliferation during certain stages of B-cell maturation. Belongs to the IL-7/IL-9 family.	0.716
CD44	RAG2	ENSOCUP00000048202	ENSOCUP00000020912	CD44 molecule (Indian blood group).	V(D)J recombination-activating protein 2; Core component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T- cell receptor genes in developing B and T-lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. DNA cleavage by the RAG complex occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the pho [...]	0.661
CTCF	EBF1	ENSOCUP00000036313	ENSOCUP00000007763	CCCTC-binding factor.	EBF transcription factor 1.	0.466