STRINGSTRING
ARF6 ARF6 COX4I1 COX4I1 CUL1 CUL1 NEDD8 NEDD8 CAPN1 CAPN1 ZYG11B ZYG11B ARL3 ARL3 DIS3 DIS3 UBR5 UBR5 ITM2A ITM2A ZER1 ZER1 IST1 IST1 SYS1 SYS1 CUL4A CUL4A CUL5 CUL5 CAPNS1 CAPNS1 NAA60 NAA60 ADNP ADNP CUL2 CUL2 UBE2B-2 UBE2B-2 ATXN2L ATXN2L RGS10 RGS10 RGS4 RGS4 CUL4B CUL4B COG7 COG7 VCL VCL UBE2D3 UBE2D3 COG5 COG5 COPS8 COPS8 RAB1A RAB1A CCL2 CCL2 CAPN2 CAPN2 ADNP2 ADNP2 UBR2 UBR2 RIC1 RIC1 NAA80 NAA80 HNRNPF HNRNPF RSPRY1 RSPRY1 ADH6 ADH6 CUL3 CUL3 ARL8B ARL8B SLC10A7 SLC10A7 BCL2 BCL2 RAB2A RAB2A RGS2 RGS2 UBE2F UBE2F RAB2B RAB2B RAB2A-2 RAB2A-2 FLNC FLNC DARS1 DARS1 GAPDH GAPDH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARF6ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
COX4I1Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives tran [...] (169 aa)
CUL1Cullin 1; Belongs to the cullin family. (775 aa)
NEDD8NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex UBE1C-APPBP1 and linkage to the E2 enzyme UBE2M. Attachment of NEDD8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins (By similarity). (81 aa)
CAPN1Calpain-1 catalytic subunit; Calcium-regulated non-lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction. (651 aa)
ZYG11BZyg-11 family member B, cell cycle regulator. (744 aa)
ARL3ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (182 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (957 aa)
UBR5Ubiquitin protein ligase E3 component n-recognin 5. (2769 aa)
ITM2AIntegral membrane protein 2A. (340 aa)
ZER1Zyg-11 related cell cycle regulator. (765 aa)
IST1IST1 factor associated with ESCRT-III. (372 aa)
SYS1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)
CUL4ACullin 4A; Belongs to the cullin family. (759 aa)
CUL5Cullin-5; Core component of multiple SCF-like ECS (Elongin BC-Cullin 2/5-SOCS-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The functional specificity of the E3 ubiquitin-protein ligase complex depends on the variable substrate recognition component. ECS(SOCS1) seems to direct ubiquitination of JAK2. Seems to be involved in proteosomal degradation of p53/TP53 stimula [...] (780 aa)
CAPNS1Calpain small subunit 1; Regulatory subunit of the calcium-regulated non-lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction. (266 aa)
NAA60N(alpha)-acetyltransferase 60, NatF catalytic subunit. (242 aa)
ADNPActivity dependent neuroprotector homeobox. (1104 aa)
CUL2Cullin 2; Belongs to the cullin family. (745 aa)
UBE2B-2Ubiquitin-conjugating enzyme E2 B; Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In association with the E3 enzyme BRE1 (RNF20 and/or RNF40), it plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B at 'Lys- 120' to form H2BK120ub1. H2BK120ub1 gives a specific tag for epigenetic transcriptional activation, elongation by RNA polymerase II, telomeric silencing, and is also a prerequisite for H3K4me and H3K79me formation. In vitro catalyzes 'Lys-11'-, as well as 'Lys-48'- and 'Lys-63'-linked polyubiqui [...] (287 aa)
ATXN2LAtaxin 2 like. (1036 aa)
RGS10Regulator of G protein signaling 10. (173 aa)
RGS4Regulator of G-protein signaling 4; Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Activity on G(z)-alpha is inhibited by phosphorylation of the G-protein. Activity on G(z)-alpha and G(i)- alpha-1 is inhibited by palmitoylation of the G-protein (By similarity). (237 aa)
CUL4BCullin 4B; Belongs to the cullin family. (901 aa)
COG7Component of oligomeric golgi complex 7. (1074 aa)
VCLVinculin. (1241 aa)
UBE2D3Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
COG5Component of oligomeric golgi complex 5. (885 aa)
COPS8PCI domain-containing protein. (298 aa)
RAB1ARAB1A, member RAS oncogene family. (205 aa)
CCL2C-C motif chemokine 2; Acts as a ligand for C-C chemokine receptor CCR2 (By similarity). Signals through binding and activation of CCR2 and induces a strong chemotactic response and mobilization of intracellular calcium ions (By similarity). Exhibits a chemotactic activity for monocytes and basophils but not neutrophils or eosinophils (By similarity). Plays an important role in mediating peripheral nerve injury-induced neuropathic pain (By similarity). Increases NMDA-mediated synaptic transmission in both dopamine D1 and D2 receptor-containing neurons, which may be caused by MAPK/ERK-d [...] (125 aa)
CAPN2Calpain-2 catalytic subunit; Calcium-regulated non-lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction. Proteolytically cleaves MYOC at 'Arg-226'. Proteolytically cleaves CPEB3 following neuronal stimulation which abolishes CPEB3 translational repressor activity, leading to translation of CPEB3 target mRNAs. (832 aa)
ADNP2ADNP homeobox 2. (1132 aa)
UBR2E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1753 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1423 aa)
NAA80N(alpha)-acetyltransferase 80, NatH catalytic subunit. (288 aa)
HNRNPFUncharacterized protein. (543 aa)
RSPRY1Ring finger and SPRY domain containing 1. (576 aa)
ADH6Uncharacterized protein. (409 aa)
CUL3Cullin 3; Belongs to the cullin family. (771 aa)
ARL8BUncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (138 aa)
SLC10A7Solute carrier family 10 member 7. (378 aa)
BCL2BH4_2 domain-containing protein. (389 aa)
RAB2ARas-related protein Rab-2A. (342 aa)
RGS2RGS domain-containing protein. (229 aa)
UBE2FUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (220 aa)
RAB2BRas-related protein Rab-2A; Required for protein transport from the endoplasmic reticulum to the Golgi complex; Belongs to the small GTPase superfamily. Rab family. (215 aa)
RAB2A-2Ras-related protein Rab-2A. (217 aa)
FLNCFilamin C. (2628 aa)
DARS1Aspartyl-tRNA synthetase. (535 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...] (333 aa)
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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