37 items (Tetraodon nigroviridis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3C3I7_TETNG	Collagen, type I, alpha 2. (1356 aa)
	H3C049_TETNG	Uncharacterized protein. (393 aa)
	H3C0B6_TETNG	Collagen, type I, alpha 1b. (1485 aa)
	H3C0I8_TETNG	Integrin beta; Belongs to the integrin beta chain family. (785 aa)
	H3C470_TETNG	Integrin beta. (1802 aa)
	H3C4S8_TETNG	Integrin, alpha 6b; Belongs to the integrin alpha chain family. (1080 aa)
	H3C5Z4_TETNG	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (922 aa)
	H3C6N6_TETNG	Integrin, alpha 8; Belongs to the integrin alpha chain family. (1048 aa)
	H3C950_TETNG	Uncharacterized protein. (330 aa)
	H3CAF7_TETNG	Integrin, alpha 11b; Belongs to the integrin alpha chain family. (1192 aa)
	H3CD00_TETNG	Integrin alpha 4; Belongs to the integrin alpha chain family. (976 aa)
	H3CFJ4_TETNG	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1048 aa)
	H3CK39_TETNG	Uncharacterized protein. (1063 aa)
	H3CML1_TETNG	Integrin beta. (763 aa)
	H3CN97_TETNG	Integrin beta; Belongs to the integrin beta chain family. (790 aa)
	H3CQ26_TETNG	Integrin, alpha 1; Belongs to the integrin alpha chain family. (1159 aa)
	H3CRB1_TETNG	Integrin beta; Belongs to the integrin beta chain family. (804 aa)
	H3CTI5_TETNG	Integrin beta; Belongs to the integrin beta chain family. (799 aa)
	H3CUZ6_TETNG	Procollagen, type IX, alpha 2. (693 aa)
	H3CVR4_TETNG	Integrin beta; Belongs to the integrin beta chain family. (768 aa)
	H3CVZ9_TETNG	Integrin, alpha 11a; Belongs to the integrin alpha chain family. (1161 aa)
	H3D0R7_TETNG	Collagen, type I, alpha 1a. (1460 aa)
	H3D1V2_TETNG	Integrin beta; Belongs to the integrin beta chain family. (800 aa)
	H3D4R0_TETNG	Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family. (1051 aa)
	H3D5P1_TETNG	Integrin, alpha 3b; Belongs to the integrin alpha chain family. (1044 aa)
	ITGA7	Integrin subunit alpha 7; Belongs to the integrin alpha chain family. (1077 aa)
	H3DCL8_TETNG	Integrin, alpha M (complement component 3 receptor 3 subunit); Belongs to the integrin alpha chain family. (1002 aa)
	H3DE56_TETNG	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1038 aa)
	H3DF15_TETNG	Filamin C, gamma a (actin binding protein 280). (2728 aa)
	H3DGR8_TETNG	Integrin, alpha 9; Belongs to the integrin alpha chain family. (2504 aa)
	H3DHR6_TETNG	Integrin, alpha 6a; Belongs to the integrin alpha chain family. (1082 aa)
	H3DI37_TETNG	Fibronectin 1a. (2519 aa)
	Q4RLG6_TETNG	Chromosome undetermined SCAF15021, whole genome shotgun sequence. (156 aa)
	H3DPZ3_TETNG	Integrin, alpha V; Belongs to the integrin alpha chain family. (1043 aa)
	H3DQA3_TETNG	VWFA domain-containing protein. (137 aa)
	H3DQB1_TETNG	Integrin, alpha 10; Belongs to the integrin alpha chain family. (1067 aa)
	H3DQE2_TETNG	Integrin beta; Belongs to the integrin beta chain family. (548 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3C049_TETNG	H3C0I8_TETNG	ENSTNIP00000001615	ENSTNIP00000001754	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.584
H3C049_TETNG	H3C470_TETNG	ENSTNIP00000001615	ENSTNIP00000003039	Uncharacterized protein.	Integrin beta.	0.585
H3C049_TETNG	H3C4S8_TETNG	ENSTNIP00000001615	ENSTNIP00000003247	Uncharacterized protein.	Integrin, alpha 6b; Belongs to the integrin alpha chain family.	0.735
H3C049_TETNG	H3C5Z4_TETNG	ENSTNIP00000001615	ENSTNIP00000003664	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.756
H3C049_TETNG	H3C6N6_TETNG	ENSTNIP00000001615	ENSTNIP00000003907	Uncharacterized protein.	Integrin, alpha 8; Belongs to the integrin alpha chain family.	0.707
H3C049_TETNG	H3C950_TETNG	ENSTNIP00000001615	ENSTNIP00000004772	Uncharacterized protein.	Uncharacterized protein.	0.535
H3C049_TETNG	H3CAF7_TETNG	ENSTNIP00000001615	ENSTNIP00000005229	Uncharacterized protein.	Integrin, alpha 11b; Belongs to the integrin alpha chain family.	0.645
H3C049_TETNG	H3CD00_TETNG	ENSTNIP00000001615	ENSTNIP00000006123	Uncharacterized protein.	Integrin alpha 4; Belongs to the integrin alpha chain family.	0.751
H3C049_TETNG	H3CFJ4_TETNG	ENSTNIP00000001615	ENSTNIP00000007021	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.751
H3C049_TETNG	H3CN97_TETNG	ENSTNIP00000001615	ENSTNIP00000009728	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.572
H3C049_TETNG	H3CQ26_TETNG	ENSTNIP00000001615	ENSTNIP00000010360	Uncharacterized protein.	Integrin, alpha 1; Belongs to the integrin alpha chain family.	0.645
H3C049_TETNG	H3CVR4_TETNG	ENSTNIP00000001615	ENSTNIP00000012348	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.653
H3C049_TETNG	H3CVZ9_TETNG	ENSTNIP00000001615	ENSTNIP00000012433	Uncharacterized protein.	Integrin, alpha 11a; Belongs to the integrin alpha chain family.	0.645
H3C049_TETNG	H3D1V2_TETNG	ENSTNIP00000001615	ENSTNIP00000014490	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.572
H3C049_TETNG	H3D4R0_TETNG	ENSTNIP00000001615	ENSTNIP00000015499	Uncharacterized protein.	Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.	0.751
H3C049_TETNG	H3D5P1_TETNG	ENSTNIP00000001615	ENSTNIP00000015830	Uncharacterized protein.	Integrin, alpha 3b; Belongs to the integrin alpha chain family.	0.756
H3C049_TETNG	H3DCL8_TETNG	ENSTNIP00000001615	ENSTNIP00000018261	Uncharacterized protein.	Integrin, alpha M (complement component 3 receptor 3 subunit); Belongs to the integrin alpha chain family.	0.775
H3C049_TETNG	H3DE56_TETNG	ENSTNIP00000001615	ENSTNIP00000018799	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.735
H3C049_TETNG	H3DF15_TETNG	ENSTNIP00000001615	ENSTNIP00000019109	Uncharacterized protein.	Filamin C, gamma a (actin binding protein 280).	0.449
H3C049_TETNG	H3DGR8_TETNG	ENSTNIP00000001615	ENSTNIP00000019712	Uncharacterized protein.	Integrin, alpha 9; Belongs to the integrin alpha chain family.	0.751