8 items (Tetraodon nigroviridis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3C2G2_TETNG	Uncharacterized protein. (183 aa)
	H3C7N0_TETNG	Uncharacterized protein. (255 aa)
	H3C8J3_TETNG	Uncharacterized protein. (322 aa)
	H3C9E0_TETNG	Uncharacterized protein. (225 aa)
	H3CA11_TETNG	Laminin, beta 2 (laminin S). (1783 aa)
	H3D7F3_TETNG	Laminin, gamma 3. (790 aa)
	H3D8A9_TETNG	Laminin, beta 1a. (1779 aa)
	H3DG70_TETNG	Uncharacterized protein. (2981 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3C2G2_TETNG	H3C7N0_TETNG	ENSTNIP00000002430	ENSTNIP00000004252	Uncharacterized protein.	Uncharacterized protein.	0.677
H3C2G2_TETNG	H3C8J3_TETNG	ENSTNIP00000002430	ENSTNIP00000004565	Uncharacterized protein.	Uncharacterized protein.	0.530
H3C2G2_TETNG	H3C9E0_TETNG	ENSTNIP00000002430	ENSTNIP00000004862	Uncharacterized protein.	Uncharacterized protein.	0.878
H3C2G2_TETNG	H3CA11_TETNG	ENSTNIP00000002430	ENSTNIP00000005083	Uncharacterized protein.	Laminin, beta 2 (laminin S).	0.511
H3C2G2_TETNG	H3D7F3_TETNG	ENSTNIP00000002430	ENSTNIP00000016444	Uncharacterized protein.	Laminin, gamma 3.	0.908
H3C2G2_TETNG	H3D8A9_TETNG	ENSTNIP00000002430	ENSTNIP00000016750	Uncharacterized protein.	Laminin, beta 1a.	0.511
H3C2G2_TETNG	H3DG70_TETNG	ENSTNIP00000002430	ENSTNIP00000019514	Uncharacterized protein.	Uncharacterized protein.	0.677
H3C7N0_TETNG	H3C2G2_TETNG	ENSTNIP00000004252	ENSTNIP00000002430	Uncharacterized protein.	Uncharacterized protein.	0.677
H3C7N0_TETNG	H3C8J3_TETNG	ENSTNIP00000004252	ENSTNIP00000004565	Uncharacterized protein.	Uncharacterized protein.	0.677
H3C7N0_TETNG	H3C9E0_TETNG	ENSTNIP00000004252	ENSTNIP00000004862	Uncharacterized protein.	Uncharacterized protein.	0.677
H3C7N0_TETNG	H3CA11_TETNG	ENSTNIP00000004252	ENSTNIP00000005083	Uncharacterized protein.	Laminin, beta 2 (laminin S).	0.714
H3C7N0_TETNG	H3D7F3_TETNG	ENSTNIP00000004252	ENSTNIP00000016444	Uncharacterized protein.	Laminin, gamma 3.	0.677
H3C7N0_TETNG	H3D8A9_TETNG	ENSTNIP00000004252	ENSTNIP00000016750	Uncharacterized protein.	Laminin, beta 1a.	0.714
H3C8J3_TETNG	H3C2G2_TETNG	ENSTNIP00000004565	ENSTNIP00000002430	Uncharacterized protein.	Uncharacterized protein.	0.530
H3C8J3_TETNG	H3C7N0_TETNG	ENSTNIP00000004565	ENSTNIP00000004252	Uncharacterized protein.	Uncharacterized protein.	0.677
H3C8J3_TETNG	H3C9E0_TETNG	ENSTNIP00000004565	ENSTNIP00000004862	Uncharacterized protein.	Uncharacterized protein.	0.897
H3C8J3_TETNG	H3CA11_TETNG	ENSTNIP00000004565	ENSTNIP00000005083	Uncharacterized protein.	Laminin, beta 2 (laminin S).	0.511
H3C8J3_TETNG	H3D8A9_TETNG	ENSTNIP00000004565	ENSTNIP00000016750	Uncharacterized protein.	Laminin, beta 1a.	0.511
H3C8J3_TETNG	H3DG70_TETNG	ENSTNIP00000004565	ENSTNIP00000019514	Uncharacterized protein.	Uncharacterized protein.	0.677
H3C9E0_TETNG	H3C2G2_TETNG	ENSTNIP00000004862	ENSTNIP00000002430	Uncharacterized protein.	Uncharacterized protein.	0.878